The PANDA R package (Preferential Attachment based common Neighbor Distribution derived Associations) was designed to perform the following tasks: (1) identify significantly functionally associated protein pairs, (2) predict GO and KEGG terms for proteins, (3) make a cluster of proteins based on the significant protein pairs, (4) identify subclusters whose members are enriched in KEGG-pathways.
The devtools package is used to install R packages hosted on Github. To install PANDA, type the following commands in the R console:
library(devtools) install_github("PANDA", "nickytong")
# load the package library(PANDA) # pull out vignette vignette('PANDA')
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.