PATHChange: A Tool for Identification of Differentially Expressed Pathways using Multi-Statistic Comparison

An R tool suited to Affymetrix microarray data that combines three different statistical tests (Bootstrap, Fisher exact and Wilcoxon signed rank) to evaluate genetic pathway alterations.

AuthorFontoura, C.A.R.S. and Mombach, J.C.M.
Date of publication2016-06-17 08:18:35
MaintainerCarla Fontoura <carladriani@yahoo.com.br>
LicenseGPL-2
Version1.0

View on CRAN

Files

PATHChange
PATHChange/inst
PATHChange/inst/extdata
PATHChange/inst/extdata/path.rds
PATHChange/inst/extdata/genes.txt
PATHChange/inst/extdata/eDat.csv
PATHChange/inst/extdata/MeanData.rds
PATHChange/inst/extdata/BigPathways.txt
PATHChange/NAMESPACE
PATHChange/R
PATHChange/R/PATHChangeVenn.R PATHChange/R/PATHChangeList.R PATHChange/R/PATHChangeDat.R PATHChange/R/PATHChange.R
PATHChange/MD5
PATHChange/build
PATHChange/build/partial.rdb
PATHChange/DESCRIPTION
PATHChange/man
PATHChange/man/PATHChangeDat.Rd PATHChange/man/PATHChange-package.Rd PATHChange/man/PATHChange.Rd PATHChange/man/PATHChangeList.Rd PATHChange/man/PATHChangeVenn.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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