PIGE: Self Contained Gene Set Analysis for Gene- And Pathway-Environment Interaction Analysis

Extension of the 'ARTP' package (Yu, K., et al. (2009) <doi:10.1002/gepi.20422>) for gene- and pathway-environment interaction. A permutation and a parametric bootstrap approaches have been implemented for investigating gene- and pathway-environment interaction analysis (Truong, T., et al. (2014) <doi:10.1530/ERC-14-0121>).

Package details

AuthorBenoit Liquet, Therese Truong, Camilo Broc
MaintainerBenoit Liquet <[email protected]>
LicenseGPL (>= 2.0)
Version1.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("PIGE")

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PIGE documentation built on Aug. 30, 2017, 9:02 a.m.