LR.cont: Wald test for an adjusted model.
In PIGE: Self Contained Gene Set Analysis for Gene- And Pathway-Environment Interaction Analysis
Description
Usage
Arguments
Value
Author(s)
Description
The LR.cont function performs a Wald test for a
SNP effect. The function returns the p-value of the Wald
test. It is an Internal function used by the
permutation.snp function.
Usage
1
Arguments
x
name or numeric vector corresponding to the SNP
tested.
formula
an object of class "formula" : a symbolic
description of the model to be fitted without the
interaction term.
data
a data frame containing the variables in the
model.
Value
p-value of the Wald test for a SNP effect.
Author(s)
Benoit Liquet
benoit.liquet@isped.u-bordeaux2.fr
Therese
Truong therese.truong@inserm.fr
PIGE documentation built on May 1, 2019, 11:30 p.m.
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Description Usage Arguments Value Author(s)
Description
The LR.cont function performs a Wald test for a
SNP effect. The function returns the p-value of the Wald
test. It is an Internal function used by the
permutation.snp function.
Usage
1 |
Arguments
x |
name or numeric vector corresponding to the SNP tested. |
formula |
an object of class "formula" : a symbolic description of the model to be fitted without the interaction term. |
data |
a data frame containing the variables in the model. |
Value
p-value of the Wald test for a SNP effect.
Author(s)
Benoit Liquet
benoit.liquet@isped.u-bordeaux2.fr
Therese
Truong therese.truong@inserm.fr
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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