PMCMR Quick Reference Guide

In PMCMRplus: Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended

Introduction

In PMCMRplus function names have changed from period.separated in PMCMR (<= 4.1) to lowerCamelCase.

One factorial layout

Omnibus tests

FN in PMCMRplus | PMCMR v4.1 | Meaning ------------------|------------------|------------------------------------- kruskalTest | -- | Kruskal-Wallis test vanWaerdenTest | vanWaerden.Test| van der Waerden's normal scores test adKSampleTest | -- | Anderson-Darling k-Sample Test bwsKSampleTest | -- | Murakami k-Sample BWS normal Test normalScoresTest| -- | Lu-Smith Normal Score Test

Many-to-One comparisons

FN in PMCMRplus | PMCMR v4.1 | Meaning --------------------|--------------------|--------------------------------------------------------- dunnettTest | -- | Dunnett's test for multiple comparisons with one control ManyOneUTest | -- | Multiple comparisons with one control (multiple U-test) kwManyOneConoverTest | -- | Pairwise Test for Multiple Comparisons of Mean Rank Sums with one control (Conover's-Test) kwManyOneDunnTest |dunn.test.control | Pairwise Test for Multiple Comparisons of Mean Rank Sums with one control (Dunn's-Test) kwManyOneNdwTest | -- | Pairwise Test for Multiple Comparisons of Mean Rank Sums with one control (Nemenyi-Damico-Wolfe Test) tamhaneDunnettTest| -- | Tamhane-Dunnett's test for multiple comparisons with one control vanWaerdenManyOneTest| -- | Multiple Comparisons of normal scores (van der Waerden test) adManyOneTest | -- | Anderson-Darling Many-To-One Comparison Test bwsManyOneTest | -- | BWS Many-To-One Comparison Test

Trend tests

FN in PMCMRplus | PMCMR v4.1 | Meaning --------------------|--------------------|--------------------------------------------------------- cuzickTest | -- | Cuzick test for testing independent samples against ordered alternatives johnsonTest | -- | Johnson-Mehrotra test for testing independent samples against ordered alternatives jonckheereTest | jonckheere.test | Jonckheere-Terpstra test for testing k independent samples against ordered alternatives leTest | -- | Le's test for testing k independent samples against ordered alternatives spearmanTest | -- | Spearman test for testing k independent samples against ordered alternatives bwsTrendTest | -- | Murakami's BWS Trend Test chackoTest | -- | Chacko's Test

All-pairs comparisons

FN in PMCMRplus | PMCMR v4.1 | Meaning ------------------------|------------------------------|--------------------------------------------------------- dscfAllPairsTest | -- | Multiple Comparisons after Dwass, Steele, Critchlow and Fligner dunnettT3Test | -- | Dunnett's T3 test for multiple comparisons with unequal variances gamesHowellTest | -- | Games-Howel test for multiple comparisons with unequal variances kwAllPairsConoverTest |posthoc.kruskal.conover.test| Multiple Comparisons of Mean Rank Sums (Conover's-Test) kwAllPairsDunnTest |posthoc.kruskal.dunn.test | Pairwise Test for Multiple Comparisons of Mean Rank Sums (Dunn's-Test) kwAllPairsNemenyiTest |posthoc.kruskal.nemenyi.test| Pairwise Test for Multiple Comparisons of Mean Rank Sums (Nemenyi-Tests) lsdTest | -- | Least significant difference test for multiple comparisons scheffeTest | -- | Scheffe's test for multiple comparisons tamhaneT2Test | -- | Tamhane's T2 test for multiple comparisons with unequal variances tukeyTest | -- | Tukey's test for multiple comparisons uryWigginsHochbergTest| -- | Ury, Wiggins, Hochberg test for multiple comparisons with unequal variances vanWaerdenAllPairsTest |posthoc.vanWaerden.test | Multiple Comparisons of normal scores (van der Waerden test) adAllPairsTest | -- | Anderson-Darling All-Pairs Comparison Test bwsAllPairsTest | -- | BWS All-Pairs Comparison Test

Two factorial layout

Omnibus tests

FN in PMCMRplus | PMCMR v4.1 | Meaning -----------------|------------------|------------------------------------- durbinTest | durbin.test | Durbin's test for two-way balanced incomplete block design friedmanTest | -- | Friedman Test skillingsMackTest | -- | Skillings-Mack Test GoreTest | -- | Gore Test

Many-to-One comparisons

FN in PMCMRplus | PMCMR v4.1 | Meaning --------------------|-------|--------------------------------- frdManyOneDemsarTest | -- | Multiple Comparisons of Mean Rank Sums with a Control for Unreplicated Blocked Data (Demsar-Test) frdManyOneExactTest |--| Multiple Comparisons of Mean Rank Sums with a control for Unreplicated Blocked Data (Exact-Test) frdManyOneNemenyiTest | -- | Multiple Comparisons of Mean Rank Sums with a Control for Unreplicated Blocked Data (Nemenyi-Test)

Trend test

FN in PMCMRplus | PMCMR v4.1 | Meaning --------------------|-------|-------------------------------- pageTest | -- | Page Rank Sum Test

All-pairs comparisons

FN in PMCMRplus | PMCMR v4.1 | Meaning ------------------------|------------------------------|---------------------- durbinAllPairsTest | posthoc.durbin.test | Multiple Comparisons of Mean Rank Sums (Durbin's test) frdAllPairsConoverTest | posthoc.friedman.conover.test | Multiple Comparisons of Rank Sums for Unreplicated Blocked Data (Conover-Test) frdAllPairsExactTest | -- | Multiple Comparisons of Mean Rank Sums for Unreplicated Blocked Data (Exact-Test) frdAllPairsMillerTest | -- | Multiple Comparisons of Mean Rank Sums for Unreplicated Blocked Data (Miller-Test) frdAllPairsNemenyiTest | posthoc.friedman.nemenyi.test | Multiple Comparisons of Mean Rank Sums for Unreplicated Blocked Data (Nemenyi-Test) frdAllPairsSiegelTest | -- | Multiple Comparisons of Mean Rank Sums for Unreplicated Blocked Data (Siegel-Test) quadeAllPairsTest | posthoc.quade.test | Multiple Comparisons of Rank Sums for Unreplicated Blocked Data (Quade multiple comparison test)

PMCMRplus documentation built on Nov. 27, 2023, 1:08 a.m.