PeakSegJoint: Joint Peak Detection in Several ChIP-Seq Samples

Jointly segment several ChIP-seq samples to find the peaks which are the same and different across samples. The fast approximate maximum Poisson likelihood algorithm is described in "PeakSegJoint: fast supervised peak detection via joint segmentation of multiple count data samples" <arXiv:1506.01286> by TD Hocking and G Bourque.

Getting started

Package details

AuthorToby Dylan Hocking
MaintainerToby Dylan Hocking <[email protected]>
LicenseGPL-3
Version2018.10.3
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("PeakSegJoint")

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PeakSegJoint documentation built on Oct. 4, 2018, 1:03 a.m.