API for PheCAP
High-Throughput Phenotyping with EHR using a Common Automated Pipeline
| Global functions | |
|---|---|
| PheCAP | Man page |
| PheCAP-package | Man page |
| PhecapData | Man page Source code |
| PhecapSurrogate | Man page Source code |
| ROC.Est.FUN | Source code |
| S.FUN | Source code |
| Sinv.FUN | Source code |
| VTM | Source code |
| ehr_data | Man page |
| fit_alasso_bic | Source code |
| fit_alasso_cv | Source code |
| fit_lasso_bic | Source code |
| fit_lasso_cv | Source code |
| fit_multiple | Source code |
| fit_plain | Source code |
| fit_rf | Source code |
| fit_ridge_cv | Source code |
| fit_svm | Source code |
| fit_xgb | Source code |
| get_auc | Source code |
| get_roc | Source code |
| phecap_check_surrogates | Source code |
| phecap_generate_dictionary_file | Man page Source code |
| phecap_generate_feature_matrix | Source code |
| phecap_get_roc_auc_with_splits | Source code |
| phecap_impose_dropout | Source code |
| phecap_perform_majority_voting | Man page Source code |
| phecap_plot_roc_curves | Man page |
| phecap_predict_phenotype | Man page Source code |
| phecap_read_or_set_frame | Source code |
| phecap_restore_rng_seed | Source code |
| phecap_run_feature_extraction | Man page Source code |
| phecap_set_rng_seed | Source code |
| phecap_train_phenotyping_model | Man page Source code |
| phecap_validate_phenotyping_model | Man page Source code |
| predict_linear | Source code |
| predict_multiple | Source code |
| predict_rf | Source code |
| predict_svm | Source code |
| predict_xgb | Source code |
| print.PhecapData | Source code |
| print.PhecapFeatureExtraction | Source code |
| print.PhecapModel | Source code |
| print.PhecapValidation | Source code |
| sum.I | Source code |
