phecap_predict_phenotype: Predict Phenotype

In PheCAP: High-Throughput Phenotyping with EHR using a Common Automated Pipeline

Description

Compute predicted probability of having the phenotype for each patient in the dataset.

Usage

phecap_predict_phenotype(data, model)

Arguments

data	an object of class PhecapData, obtained by calling PhecapData(...).
model	an object of class PhecapModel, probably returned from phecap_train_phenotyping_model.

Value

A data.frame with two columns:

patient_index

patient identifier

,

prediction

predicted phenotype

.

See Also

See PheCAP-package for code examples.

PheCAP documentation built on Sept. 17, 2020, 5:07 p.m.