API for PhenotypeR
Assess Study Cohorts Using a Common Data Model

Global functions
PhenotypeR Man page
PhenotypeR-package Man page
addCodelistAttribute Man page Source code
addDaysBetween Source code
addExposureDuration Source code
bind Man page
checkEmptyCodelists Source code
checkWhichDiagnostics Source code
checksCohortDiagnostics Source code
checksPopulationDiagnostics Source code
codelistDiagnostics Man page Source code
cohortDiagnostics Man page Source code
cohortDoc Man page
cohortSampleDoc Man page
copyDirectory Source code
createMatchedCohorts Source code
databaseDiagnostics Man page Source code
directoryDoc Man page
duplicatedCodelists Source code
expectationsDoc Man page
exportSummarisedResult Man page
fetchExpectations Source code
findIngredients Source code
getAllCheckOptions Source code
getCohortExpectations Man page Source code
getIngredientConceptSet Source code
getRecords Source code
getTableFromDomain Source code
hasRows Source code
importSummarisedResult Man page
matchedDoc Man page
measurementSampleDoc Man page
phenotypeDiagnostics Man page Source code
populationDiagnostics Man page Source code
populationSampleDoc Man page
reexports Man page
removeLines Source code
resultDoc Man page
sampleRecords Source code
settings Man page
shinyDiagnostics Man page Source code
summariseAchillesCodeUse Man page
summariseCheckConcept Source code
summariseCheckConceptSource Source code
summariseCheckDaysBetween Source code
summariseCheckDaysSupply Source code
summariseCheckDose Source code
summariseCheckExposureDuration Source code
summariseCheckMissing Source code
summariseCheckQuantity Source code
summariseCheckRoute Source code
summariseCheckSig Source code
summariseCheckType Source code
summariseCheckVerbatimEndDate Source code
summariseCodeUse Man page
summariseCohortCodeUse Man page
summariseDrugExposureDiagnostics Source code
summariseOrphanCodes Man page
suppress Man page
survivalDoc Man page
tableCohortExpectations Man page Source code
tableDrugExposureDiagnostics Source code
time Source code
validateDirectory Source code
PhenotypeR documentation built on Feb. 9, 2026, 1:07 a.m.