PhySortR: A Fast, Flexible Tool for Sorting Phylogenetic Trees

Screens and sorts phylogenetic trees in both traditional and extended Newick format. Allows for the fast and flexible screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non- Exclusive clades that includes a defined portion of non-target taxa.

Getting started

Package details

AuthorTimothy Stephens [aut, cre, trl] (R port), Debashish Bhattacharya [aut], Mark Ragan [aut], Cheong Xin Chan [aut, cph] (Original Perl implementation)
MaintainerTimothy Stephens <[email protected]>
LicenseGPL (>= 3)
Version1.0.8
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("PhySortR")

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PhySortR documentation built on Aug. 6, 2018, 9:03 a.m.