PhySortR: A Fast, Flexible Tool for Sorting Phylogenetic Trees

Description Details Author(s) References See Also

Description

PhySortR provides a quick and highly flexible function for the screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non-Exclusive clades that includes a defined portion of non-target taxa. Support is also provided for both traditional and extended Newick formatted phylogenetic trees.

A full list of functions can be displayed by library(help = PhySortR).

Details

Package: PhySortR
Type: Package
Version: 1.0.8
Date: 2018-07-20
License: GPL (>= 3)

Author(s)

Timothy G. Stephens, Debashish Bhattacharya, Mark A. Ragan, Cheong Xin Chan

Maintainer: Timothy G. Stephens <timothy.stephens1@uqconnect.edu.au>

References

Stephens TG, Bhattacharya D, Ragan MA, Chan CX. 2016. PhySortR: a fast, flexible tool for sorting phylogenetic trees in R. PeerJ, 4:e2038, DOI:10.7717/peerj.2038

See Also

phytools ape


PhySortR documentation built on May 1, 2019, 10:56 p.m.

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