PlasmaMutationDetector: Tumor Mutation Detection in Plasma

Aims at detecting single nucleotide variation (SNV) and insertion/deletion (INDEL) in circulating tumor DNA (ctDNA), used as a surrogate marker for tumor, at each base position of an Next Generation Sequencing (NGS) analysis. Mutations are assessed by comparing the minor-allele frequency at each position to the measured PER in control samples.

Getting started

Package details

AuthorYves Rozenholc, Nicolas P├ęcuchet, Pierre Laurent-Puig
MaintainerYves Rozenholc <yves.rozenholc@parisdescartes.fr>
LicenseMIT + file LICENSE
Version1.7.2
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("PlasmaMutationDetector")

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PlasmaMutationDetector documentation built on May 2, 2019, 10:10 a.m.