PlasmaMutationDetector: Tumor Mutation Detection in Plasma
Version 1.6.2

Aims at detecting single nucleotide variation (SNV) and insertion/deletion (INDEL) in circulating tumor DNA (ctDNA), used as a surrogate marker for tumor, at each base position of an Next Generation Sequencing (NGS) analysis. Mutations are assessed by comparing the minor-allele frequency at each position to the measured PER in control samples.

Getting started

Package details

AuthorYves Rozenholc, Nicolas Pécuchet, Pierre Laurent-Puig
Date of publication2017-11-15 13:30:36 UTC
MaintainerYves Rozenholc <[email protected]>
LicenseMIT + file LICENSE
Version1.6.2
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("PlasmaMutationDetector")

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PlasmaMutationDetector documentation built on Nov. 17, 2017, 7:43 a.m.