totHapcombCount: calculate the total nr of possible haplotype combinations
In PolyHaplotyper: Assignment of Haplotypes Based on SNP Dosages in Diploids and Polyploids
Description
Usage
Arguments
Details
Value
Examples
View source: R/PolyHaplotyper.R
Description
calculate the total nr of possible haplotype combinations
Usage
1
totHapcombCount(ploidy, nmrk)
Arguments
ploidy
a vector of 1 or more ploidy levels
nmrk
a vector of 1 or more numbers of markers per haploblock
Details
nmrk is used to calculate the total number of possible haplotypes
= 2^nmrk. The shorter vector of ploidy and nmrk is recycled.
Value
a vector with the number of possible haplotype combinations for
each pair of ploidy and nmrk values
Examples
1
totHapcombCount(ploidy=4, nmrk=c(1:8))
PolyHaplotyper documentation built on June 17, 2021, 5:12 p.m.
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Description Usage Arguments Details Value Examples
View source: R/PolyHaplotyper.R
Description
calculate the total nr of possible haplotype combinations
Usage
1 | totHapcombCount(ploidy, nmrk)
|
Arguments
ploidy |
a vector of 1 or more ploidy levels |
nmrk |
a vector of 1 or more numbers of markers per haploblock |
Details
nmrk is used to calculate the total number of possible haplotypes = 2^nmrk. The shorter vector of ploidy and nmrk is recycled.
Value
a vector with the number of possible haplotype combinations for each pair of ploidy and nmrk values
Examples
1 | totHapcombCount(ploidy=4, nmrk=c(1:8))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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