getDDN: getDDN

In PriorCD: Prioritizing Cancer Drugs for Interested Cancer

Description

This function is used to generate drug drug similarity network.

Usage

getDDN(drug.el, r.set, candidates, file = "network.html")

Arguments

drug.el	A edge list of drugs, which is a two-column matrix, each row defines one edge. Numbers in the edge list represent NSC-ID of drugs.
r.set	A set of drugs that you used to prioritize candidates.
candidates	A set of drugs that have been prioritized.
file	file = "network.html"(default). File name and path where to save the HTML web page. Currently only .html formats are supported.

Value

A HTML web page within drug drug similarity network

Examples

e <- getData("drug.edgelist")
brc <- getData("breast_cancer")
candidates <- getData("brc_candidates")
getDDN(e, brc, candidates)

PriorCD documentation built on May 2, 2019, 7:28 a.m.