Sequential blosum descriptor.
SequentialDiscreteBlosum: Sequential discrete blosum descriptor with step size=2.
In ProteinDescriptors: Generates Various Protein Descriptors for Machine Learning Algorithms
Description
Usage
Arguments
Value
Examples
View source: R/SequentialDiscreteBlosum.R
Description
SequentialDiscreteBlosum returns the sum of the concatenation of
blosum descriptors of amino acids at every step size in a protein sequence.
Usage
1
Arguments
x
A string of amino acid letters
Value
A 40 dimensional numeric vector
Examples
1
2
x = "LALHLLLLHMHMMDRSLLLH"
SequentialDiscreteBlosum(x)
ProteinDescriptors documentation built on May 29, 2017, 12:14 p.m.
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Description Usage Arguments Value Examples
View source: R/SequentialDiscreteBlosum.R
Description
SequentialDiscreteBlosum returns the sum of the concatenation of
blosum descriptors of amino acids at every step size in a protein sequence.
Usage
1 |
Arguments
x |
A string of amino acid letters |
Value
A 40 dimensional numeric vector
Examples
1 2 | x = "LALHLLLLHMHMMDRSLLLH"
SequentialDiscreteBlosum(x)
|
ProteinDescriptors documentation built on May 29, 2017, 12:14 p.m.
Search within the ProteinDescriptors package
Search all R packages, documentation and source code
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