WangF: To perform QTL mapping with wang method

In QTL.gCIMapping.GUI: QTL Genome-Wide Composite Interval Mapping with Graphical User Interface

Description

Genome-wide Composite Interval Mapping

Usage

WangF(pheRaw,genRaw,mapRaw1,yygg1,flagRIL,cov_en,Population,WalkSpeed,CriLOD)

Arguments

pheRaw	phenotype matrix.
genRaw	genotype matrix.
mapRaw1	linkage map matrix.
yygg1	the transformed covariate matrix .
flagRIL	if RIL or not.
cov_en	raw covariate matrix.
Population	population flag.
WalkSpeed	Walk speed for Genome-wide Scanning.(WalkSpeed=1).
CriLOD	Critical LOD scores for significant QTL (CriLOD=2.5).

Author(s)

Zhang Ya-Wen, Wen Yang-Jun, Wang Shi-Bo, Zhang Yuan-Ming
Maintainer: Yuanming Zhang<[e-mail]>

Examples

## Not run: 
data(gen)
data(phe)
data(map)
wf<-WangF(pheRaw=phe,genRaw=gen,mapRaw1=map,yygg1=NULL,
flagRIL=0,cov_en=NULL,Population="DH",WalkSpeed=1,CriLOD=2.5)

## End(Not run)

QTL.gCIMapping.GUI documentation built on Oct. 23, 2020, 8:13 p.m.