simulate_axiom_summary: Simulate an Axiom array summary file

In Qploidy: Estimation of Ploidy and Detection of Aneuploidy Using Genotyping Data

Simulate an Axiom array summary file

Description

This function generates a simulated Axiom array summary file with probe IDs ending in '-A' or '-B' and sample intensities. The intensities are simulated based on the genotype of the sample: homozygous for A, homozygous for B, or heterozygous.

Usage

simulate_axiom_summary(file_path, n_probes = 100, n_samples = 10, seed)

Arguments

file_path	The path where the simulated summary file will be saved.
n_probes	Number of probes to simulate. Default is 100.
n_samples	Number of samples to simulate. Default is 10.
seed	The seed for random number generation to ensure reproducibility.

Value

None. The function writes the simulated summary content to the specified file.

Qploidy documentation built on June 8, 2025, 10 a.m.