A reaction is an independent chemical reaction corresponding for example to a well in a 96 well plate, a capillary in a rotor, a through-hole on an array, etc. Inherits: rdmlBaseType.
R6Class generator object.
The ID of this reaction
rotor : assign IDs according to the position of the sample on the rotor (1 for the 1st sample, 2 for the 2nd, ...)
plate (96/384/1536 well) : the IDs are assigned in a row-first/column-second manner. For each row, the samples are numbered according to the increasing column number. At the end of a row, the numbering starts at the first column of the next row. An example for this type of plate can be found below :
multi-array plate (BioTrove) : the IDs are assigned in a row-first/column-second manner, ignoring the organisation of sub-arrays. For each row, the samples are numbered according to the increasing column number. At the end of a row, the the next row. An example for this type of plate can be found below : todo...
reactIdType. See 'Details'.
idReferencesType. SampleID - A reference to a sample.
list of dataType.
Human readable form of the
react id (i.e. '13' -> 'B1')..
AsDataFrame(dp.type = "adp")
Represents amplification (
dp.type = "adp") or melting
dp.type = "mdp") data points of all targets as one
id to the human readable form (i.e. '13' -> 'B1'). This converted value can be
pcrFormatType. Currently, only 'ABC' and '123' are supported as
labels. For '123' '123' the
Position will look like 'r01c01', for
'ABC' '123' it will be 'A01' and for '123' 'ABC' it will be 01A. 'ABC' 'ABC'
is not currently supported. Note that 'ABC' will result in loss of
information if the experiment contains more than 26 rows!