extract: extract remix results from cvRemix object

In REMixed: Regularized Estimation in Mixed Effect Model

extract remix results from cvRemix object

Description

Extracts a build from a cvRemix object.

Usage

extract(fit, n)

Arguments

fit	output of cv.remix;
n	rank (in the 'fit$lambda') to extract.

Value

outputs from remix algorithm of rank 'n' computed by cv.remix.

See Also

cv.remix, remix.

Examples

## Not run: 
project <- getMLXdir()

ObsModel.transfo = list(S=list(AB=log10),
                        linkS="yAB",
                        R=rep(list(S=function(x){x}),5),
                        linkR = paste0("yG",1:5))

alpha=list(alpha0=NULL,
           alpha1=setNames(paste0("alpha_1",1:5),paste0("yG",1:5)))

y = c(S=5,AB=1000)

cv.outputs = cv.Remix(project = project,
            dynFUN = dynFUN_demo,
            y = y,
            ObsModel.transfo = ObsModel.transfo,
            alpha = alpha,
            selfInit = TRUE,
            eps1=10**(-2),
            ncores=8,
            eps2=1)

res <- extract(cv.outputs,6)

plotConvergence(res)

trueValue = read.csv(paste0(dirname(project),"/demoSMLX/Simulation/populationParameters.txt"))


plotSAEM(res,paramToPlot = c("delta_S_pop","phi_S_pop","delta_AB_pop"),trueValue=trueValue)

## End(Not run)

REMixed documentation built on June 28, 2025, 1:09 a.m.