LightResponseCurveFitter-class: Class '"LightResponseCurveFitter"'

LightResponseCurveFitter-classR Documentation

Class "LightResponseCurveFitter"

Description

Base class for fitting parameters to light response curves (LRC)

Concrete classes for the following LRC functions are available:

  • common rectangular hyperbolic light-response: RectangularLRCFitter-class

  • nonrectangular hyperbolic light-response: NonrectangularLRCFitter-class

  • logistic sigmoid light-response: LogisticSigmoidLRCFitter-class

They mostly differ in their prediction of GPP by method LightResponseCurveFitter_predictGPP.

Extends

All reference classes extend and inherit methods from "envRefClass".

Methods

LightResponseCurveFitter_computeLRCGradient(theta, Rg, VPD, Temp, VPD0, fixVPD, TRef):
LightResponseCurveFitter_predictGPP(Rg, ...):
LightResponseCurveFitter_predictLRC(theta, Rg, VPD, Temp, VPD0, fixVPD, TRef):
LightResponseCurveFitter_computeCost(thetaOpt, theta, iOpt, flux, sdFlux, parameterPrior, sdParameterPrior, ...):
LightResponseCurveFitter_optimLRC(theta, iOpt, sdParameterPrior, ..., ctrl, isUsingHessian):
LightResponseCurveFitter_isParameterInBounds(theta, sdTheta, RRefNight, ctrl):
LightResponseCurveFitter_optimLRCOnAdjustedPrior(theta, iOpt, dsDay, parameterPrior, ctrl, ...):
LightResponseCurveFitter_getOptimizedParameterPositions(isUsingFixedVPD, isUsingFixedAlpha):
LightResponseCurveFitter_optimLRCBounds(theta0, parameterPrior, ..., lastGoodParameters, ctrl):
LightResponseCurveFitter_getParameterInitials(thetaPrior):
LightResponseCurveFitter_getPriorScale(thetaPrior, medianRelFluxUncertainty, nRec, ctrl):
LightResponseCurveFitter_getPriorLocation(NEEDay, RRefNight, E0):
LightResponseCurveFitter_fitLRC(dsDay, E0, sdE0, RRefNight, controlGLPart, lastGoodParameters):
LightResponseCurveFitter_getParameterNames():

Author(s)

TW


REddyProc documentation built on May 29, 2024, 12:10 p.m.