REddyProc
Post Processing of (Half-)Hourly Eddy-Covariance Measurements

Package index
Search the REddyProc package
Vignettes
Functions
347
Source code
44
Man pages
129
Home
/
CRAN
/
REddyProc: Post Processing of (Half-)Hourly Eddy-Covariance Measurements
/
Man pages

Man pages for REddyProc
Post Processing of (Half-)Hourly Eddy-Covariance Measurements

BerkeleyJulianDateToPOSIXctBerkeleyJulianDateToPOSIXct
DEGebExampleEddy covariance data from Gebesee crop site, Germany
estimate_vpd_from_dewEstimate VPD from assuming dewpoint at daily minimum...
Example_DETha98Eddy covariance data from Tharandt, Germany
extract_FN15extract processing results with columns corresponding to...
fCalcAVPfromVMFandPressfCalcAVPfromVMFandPress
fCalcETfromLEfCalcETfromLE
fCalcExtRadiationfCalcExtRadiation
fCalcPotRadiationfCalcPotRadiation
fCalcRHfromAVPandTairfCalcRHfromAVPandTair
fCalcSVPfromTairfCalcSVPfromTair
fCalcVPDfromRHandTairfCalcVPDfromRHandTair
fCheckHHTimeSeriesfCheckHHTimeSeries
fConvertCtoKfConvertCtoK
fConvertGlobalToVisiblefConvertGlobalToVisible
fConvertKtoCfConvertKtoC
fConvertTimeToPosixfConvertTimeToPosix
fConvertVisibleWm2toPhotonsfConvertVisibleWm2toPhotons
filterLongRunsfilterLongRuns
filterLongRunsInVectorfilterLongRunsInVector
fLloydTaylorTemperature dependence of soil respiration
fLoadAmeriflux22Read basic variables from Ameriflux standard (as of 2022)...
fLoadEuroFlux16fLoadEuroFlux16
fLoadFluxnet15Read a file in the format of Fluxnet 2015 release
fLoadTXTIntoDataframeLoad text file with one header and one unit row into data...
fWriteDataframeToFilefWriteDataframeToFile
getAmerifluxToBGC05VariableNameMappinggetAmerifluxToBGC05VariableNameMapping
getBGC05ToAmerifluxVariableNameMappinggetBGC05ToAmerifluxVariableNameMapping
getExamplePathgetExamplePath
getFilledExampleDETha98DatagetFilledExampleDETha98Data
getREddyProcExampleDirgetREddyProcExampleDir
get_timestep_hoursGet the timestep in fractional hours
getTZonegetTZone
globalDummyVarsglobalDummyVars
LightResponseCurveFitterLightResponseCurveFitter
LightResponseCurveFitter-classClass '"LightResponseCurveFitter"'
LightResponseCurveFitter_computeCostLightResponseCurveFitter computeCost
LightResponseCurveFitter_computeLRCGradientLightResponseCurveFitter computeLRCGradient
LightResponseCurveFitter_fitLRCLightResponseCurveFitter fitLRC
LightResponseCurveFitter_getOptimizedParameterPositionsLightResponseCurveFitter getOptimizedParameterPositions
LightResponseCurveFitter_getParameterInitialsLightResponseCurveFitter getParameterInitials
LightResponseCurveFitter_getParameterNamesLightResponseCurveFitter getParameterNames
LightResponseCurveFitter_getPriorLocationLightResponseCurveFitter getPriorLocation
LightResponseCurveFitter_getPriorScaleLightResponseCurveFitter getPriorScale
LightResponseCurveFitter_isParameterInBoundsLightResponseCurveFitter isParameterInBounds
LightResponseCurveFitter_optimLRCLightResponseCurveFitter optimLRC
LightResponseCurveFitter_optimLRCBoundsLightResponseCurveFitter optimLRCBounds
LightResponseCurveFitter_optimLRCOnAdjustedPriorLightResponseCurveFitter optimLRCOnAdjustedPrior
LightResponseCurveFitter_predictGPPLightResponseCurveFitter predictGPP
LightResponseCurveFitter_predictLRCLightResponseCurveFitter predictLRC
LogisticSigmoidLRCFitterLogisticSigmoidLRCFitter
LogisticSigmoidLRCFitter-classClass '"LogisticSigmoidLRCFitter"'
LogisticSigmoidLRCFitter_predictGPPLogisticSigmoidLRCFitter predictGPP
NonrectangularLRCFitterNonrectangularLRCFitter
NonrectangularLRCFitter-classClass '"NonrectangularLRCFitter"'
NonrectangularLRCFitter_getParameterNamesNonrectangularLRCFitter getParameterNames
NonrectangularLRCFitter_predictGPPNonrectangularLRCFitter predictGPP
partGLControlpartGLControl
partGLControlLasslopCompatiblepartGLControlLasslopCompatible
partGLExtractStandardDatapartGLExtractStandardData
partitionNEEGLpartitionNEEGL
pipePipe operator
POSIXctToBerkeleyJulianDatePOSIXctToBerkeleyJulianDate
read_from_ameriflux22Extract basic variables from Ameriflux standard (as of 2022)...
read_from_fluxnet15extract REddyProc input columns from data.frame in Fluxnet15...
RectangularLRCFitterRectangularLRCFitter
RectangularLRCFitter-classClass '"RectangularLRCFitter"'
RectangularLRCFitterCVersionRectangularLRCFitterCVersion
RectangularLRCFitterCVersion-classClass '"RectangularLRCFitterCVersion"'
RectangularLRCFitter_predictGPPRectangularLRCFitter predictGPP
REddyProc_defaultunitsGet the default units for given variables
REddyProc-packagePost Processing of (Half-)Hourly Eddy-Covariance Measurements
renameVariablesInDataframerenameVariablesInDataframe
RHLightResponseCostCRHLightResponseCostC
sEddyProcsEddyProc
sEddyProc-classClass '"sEddyProc"'
sEddyProc_initializesEddyProc initialize
sEddyProc_sApplyUStarScensEddyProc sApplyUStarScen
sEddyProc_sCalcPotRadiationsEddyProc sCalcPotRadiation
sEddyProc_sEstimateUstarScenariossEddyProc sEstimateUstarScenarios
sEddyProc_sEstUstarTholdsEddyProc$sEstUstarThreshold - Estimating ustar threshold
sEddyProc_sEstUstarThresholdsEddyProc$sEstUstarThreshold - Estimating ustar threshold
sEddyProc_sEstUstarThresholdDistributionsEddyProc sEstUstarThresholdDistribution
sEddyProc_sExportDatasEddyProc sExportData
sEddyProc_sExportResultssEddyProc sExportResults
sEddyProc_sFillInitsEddyProc$sFillInit - Initialize gap filling
sEddyProc_sFillLUTsEddyProc sFillLUT
sEddyProc_sFillMDCsEddyProc sFillMDC
sEddyProc_sFillVPDFromDewEstimate VPD from daily minimum temperature
sEddyProc_sGetDatasEddyProc sGetData
sEddyProc_sGetEstimatedUstarThresholdDistributionsEddyProc sGetEstimatedUstarThresholdDistribution
sEddyProc_sGetUstarScenariossEddyProc sGetUstarScenarios
sEddyProc_sGetUstarSuffixessEddyProc sGetUstarSuffixes
sEddyProc_sGLFluxPartitionsEddyProc sGLFluxPartition
sEddyProc_sGLFluxPartitionUStarScenssEddyProc sGLFluxPartitionUStarScens
sEddyProc_sMDSGapFillsEddyProc sMDSGapFill
sEddyProc_sMDSGapFillAfterUstarsEddyProc sMDSGapFillAfterUstar
sEddyProc_sMDSGapFillAfterUStarDistrsEddyProc sMDSGapFillAfterUStarDistr
sEddyProc_sMDSGapFillUStarScenssEddyProc sMDSGapFillUStarScens
sEddyProc_sMRFluxPartitionsEddyProc sMRFluxPartition
sEddyProc_sMRFluxPartitionUStarScenssEddyProc sMRFluxPartitionUStarScens
sEddyProc_sPlotDailySumssEddyProc$sPlotDailySums - Image with daily sums of each year
sEddyProc_sPlotDailySumsYsEddyProc$sPlotDailySumsY - Plot daily sum of specified year
sEddyProc_sPlotDiurnalCyclesEddyProc sPlotDiurnalCycle
sEddyProc_sPlotFingerprintsEddyProc sPlotFingerprint
sEddyProc_sPlotFingerprintYsEddyProc sPlotFingerprintY
sEddyProc_sPlotHHFluxessEddyProc sPlotHHFluxes
sEddyProc_sPlotHHFluxesYsEddyProc sPlotHHFluxesY
sEddyProc_sPlotNEEVersusUStarForSeasonsEddyProc sPlotNEEVersusUStarForSeason
sEddyProc_sSetLocationInfosEddyProc sSetLocationInfo
sEddyProc_sSetUstarScenariossEddyProc sSetUstarScenarios
sEddyProc_sSetUStarSeasonssEddyProc sSetUStarSeasons
sEddyProc_sTKFluxPartitionsEddyProc sTKFluxPartition
sEddyProc_sTKFluxPartitionUStarScenssEddyProc sTKFluxPartitionUStarScens
sEddyProc_update_ustarthreshold_columnsAdd columns reporting the uStar threshold for each scenario...
sEddyProc_useAnnualUStarThresholdssEddyProc useAnnualUStarThresholds
sEddyProc_useSeaonsalUStarThresholdssEddyProc useSeaonsalUStarThresholds
usControlUstarEstusControlUstarEst
usControlUstarSubsettingusControlUstarSubsetting
usCreateSeasonFactorMonthusCreateSeasonFactorMonth
usCreateSeasonFactorMonthWithinYearusCreateSeasonFactorMonthWithinYear
usCreateSeasonFactorYdayusCreateSeasonFactorYday
usCreateSeasonFactorYdayYearusCreateSeasonFactorYdayYear
usEstUstarThresholdusEstUstarThreshold - Estimating ustar threshold
usEstUstarThresholdSingleFw1BinnedusEstUstarThresholdSingleFw1Binned
usEstUstarThresholdSingleFw2BinnedusEstUstarThresholdSingleFw2Binned
usGetAnnualSeasonUStarMapusGetAnnualSeasonUStarMap
usGetSeasonalSeasonUStarMapusGetSeasonalSeasonUStarMap
usGetYearOfSeasonusGetYearOfSeason
REddyProc documentation built on March 18, 2022, 5:41 p.m.

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close