geneticCodeTable: Genetic Code Table

Description Usage Arguments See Also Examples

View source: R/geneticCodeTable.R

Description

DNA Genetic Code Table

Usage

1

Arguments

DNA

if 'TRUE', DNA code will be used, else, 'RNA' code will be used. Default is 'TRUE'

See Also

codonToAAone

codonToAAthree

codonToAAoneRNA

codonToAAthreeRNA

Examples

1
2

Example output

   FirstPosition SecondPosition ThirdPosition GeneticCode AminoAcids   AA
1              A              A             A         AAA        Lys    K
2              A              A             T         AAT        Asn    N
3              A              A             C         AAC        Asn    N
4              A              A             G         AAG        Lys    K
5              A              T             A         ATA        Ile    I
6              A              T             T         ATT        Ile    I
7              A              T             C         ATC        Ile    I
8              A              T             G         ATG        Met    M
9              A              C             A         ACA        Thr    T
10             A              C             T         ACT        Thr    T
11             A              C             C         ACC        Thr    T
12             A              C             G         ACG        Thr    T
13             A              G             A         AGA        Arg    R
14             A              G             T         AGT        Ser    S
15             A              G             C         AGC        Ser    S
16             A              G             G         AGG        Arg    R
17             T              A             A         TAA       Stop Stop
18             T              A             T         TAT        Tyr    Y
19             T              A             C         TAC        Tyr    Y
20             T              A             G         TAG       Stop Stop
21             T              T             A         TTA        Leu    L
22             T              T             T         TTT        Phe    F
23             T              T             C         TTC        Phe    F
24             T              T             G         TTG        Leu    L
25             T              C             A         TCA        Ser    S
26             T              C             T         TCT        Ser    S
27             T              C             C         TCC        Ser    S
28             T              C             G         TCG        Ser    S
29             T              G             A         TGA       Stop Stop
30             T              G             T         TGT        Cys    C
31             T              G             C         TGC        Cys    C
32             T              G             G         TGG        Trp    W
33             C              A             A         CAA        Gln    Q
34             C              A             T         CAT        His    H
35             C              A             C         CAC        His    H
36             C              A             G         CAG        Gln    Q
37             C              T             A         CTA        Leu    L
38             C              T             T         CTT        Leu    L
39             C              T             C         CTC        Leu    L
40             C              T             G         CTG        Leu    L
41             C              C             A         CCA        Pro    P
42             C              C             T         CCT        Pro    P
43             C              C             C         CCC        Pro    P
44             C              C             G         CCG        Pro    P
45             C              G             A         CGA        Arg    R
46             C              G             T         CGT        Arg    R
47             C              G             C         CGC        Arg    R
48             C              G             G         CGG        Arg    R
49             G              A             A         GAA        Glu    E
50             G              A             T         GAT        Asp    D
51             G              A             C         GAC        Asp    D
52             G              A             G         GAG        Glu    E
53             G              T             A         GTA        Val    V
54             G              T             T         GTT        Val    V
55             G              T             C         GTC        Val    V
56             G              T             G         GTG        Val    V
57             G              C             A         GCA        Ala    A
58             G              C             T         GCT        Ala    A
59             G              C             C         GCC        Ala    A
60             G              C             G         GCG        Ala    A
61             G              G             A         GGA        Gly    G
62             G              G             T         GGT        Gly    G
63             G              G             C         GGC        Gly    G
64             G              G             G         GGG        Gly    G
   FirstPosition SecondPosition ThirdPosition GeneticCode AminoAcids   AA
1              A              A             A         AAA        Lys    K
2              A              A             U         AAU        Asn    N
3              A              A             C         AAC        Asn    N
4              A              A             G         AAG        Lys    K
5              A              U             A         AUA        Ile    I
6              A              U             U         AUU        Ile    I
7              A              U             C         AUC        Ile    I
8              A              U             G         AUG        Met    M
9              A              C             A         ACA        Thr    T
10             A              C             U         ACU        Thr    T
11             A              C             C         ACC        Thr    T
12             A              C             G         ACG        Thr    T
13             A              G             A         AGA        Arg    R
14             A              G             U         AGU        Ser    S
15             A              G             C         AGC        Ser    S
16             A              G             G         AGG        Arg    R
17             U              A             A         UAA       Stop Stop
18             U              A             U         UAU        Tyr    Y
19             U              A             C         UAC        Tyr    Y
20             U              A             G         UAG       Stop Stop
21             U              U             A         UUA        Leu    L
22             U              U             U         UUU        Phe    F
23             U              U             C         UUC        Phe    F
24             U              U             G         UUG        Leu    L
25             U              C             A         UCA        Ser    S
26             U              C             U         UCU        Ser    S
27             U              C             C         UCC        Ser    S
28             U              C             G         UCG        Ser    S
29             U              G             A         UGA       Stop Stop
30             U              G             U         UGU        Cys    C
31             U              G             C         UGC        Cys    C
32             U              G             G         UGG        Trp    W
33             C              A             A         CAA        Gln    Q
34             C              A             U         CAU        His    H
35             C              A             C         CAC        His    H
36             C              A             G         CAG        Gln    Q
37             C              U             A         CUA        Leu    L
38             C              U             U         CUU        Leu    L
39             C              U             C         CUC        Leu    L
40             C              U             G         CUG        Leu    L
41             C              C             A         CCA        Pro    P
42             C              C             U         CCU        Pro    P
43             C              C             C         CCC        Pro    P
44             C              C             G         CCG        Pro    P
45             C              G             A         CGA        Arg    R
46             C              G             U         CGU        Arg    R
47             C              G             C         CGC        Arg    R
48             C              G             G         CGG        Arg    R
49             G              A             A         GAA        Glu    E
50             G              A             U         GAU        Asp    D
51             G              A             C         GAC        Asp    D
52             G              A             G         GAG        Glu    E
53             G              U             A         GUA        Val    V
54             G              U             U         GUU        Val    V
55             G              U             C         GUC        Val    V
56             G              U             G         GUG        Val    V
57             G              C             A         GCA        Ala    A
58             G              C             U         GCU        Ala    A
59             G              C             C         GCC        Ala    A
60             G              C             G         GCG        Ala    A
61             G              G             A         GGA        Gly    G
62             G              G             U         GGU        Gly    G
63             G              G             C         GGC        Gly    G
64             G              G             G         GGG        Gly    G

RGenetics documentation built on May 2, 2019, 1:26 p.m.