R/RImageJROI-package.r

#' Read and write ImageJ Region of Interest (ROI) files
#'
#' Provides functions to read and write ImageJ
#' (\url{https://imagej.net/}) Region of Interest (ROI) files, to plot
#' the ROIs and to convert them as spatstat (\url{https://spatstat.org/})
#' spatial patterns.
#'
#' ImageJ ROI files can be read into R using the
#' \code{\link{read.ijroi}} and \code{\link{read.ijzip}} functions,
#' resulting in \code{ijroi} and \code{ijzip} objects.
#'
#' The objects can be plotted using generic
#' \code{\link[=plot.ijroi]{plot}} command and converted to
#' \link[spatstat.geom]{spatstat.geom} spatial patterns by using
#' \code{\link{ij2spatstat}} function.
#'
#' The \code{ijroi} and \code{ijzip} objects can be written to file
#' using the \code{\link{write.ijroi}} and \code{\link{write.ijzip}}
#' functions.
#'
#' @name RImageJROI
#' @docType package
NULL

Try the RImageJROI package in your browser

Any scripts or data that you put into this service are public.

RImageJROI documentation built on Sept. 11, 2024, 8:09 p.m.