plot_library_complexity: Plot the library complexity
In RNAseqQC: Quality Control for RNA-Seq Data
View source: R/counts_statistics.R
plot_library_complexity R Documentation
Plot the library complexity
Description
Plot per sample the fraction of genes, versus the fraction of total counts.
Usage
plot_library_complexity(dds, show_progress = TRUE)
Arguments
dds
A DESeqDataSet
show_progress
Whether to show a progress bar of the computation.
Value
A ggplot object of the ggplot2 package that contains the library complexity plot.
Examples
library("DESeq2")
set.seed(1)
dds <- makeExampleDESeqDataSet()
plot_library_complexity(dds)
RNAseqQC documentation built on July 1, 2024, 9:07 a.m.
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View source: R/counts_statistics.R
| plot_library_complexity | R Documentation |
Plot the library complexity
Description
Plot per sample the fraction of genes, versus the fraction of total counts.
Usage
plot_library_complexity(dds, show_progress = TRUE)
Arguments
dds |
A DESeqDataSet |
show_progress |
Whether to show a progress bar of the computation. |
Value
A ggplot object of the ggplot2 package that contains the library complexity plot.
Examples
library("DESeq2")
set.seed(1)
dds <- makeExampleDESeqDataSet()
plot_library_complexity(dds)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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