MVA.anova: Type II permutation test for constrained multivariate...
In RVAideMemoire: Testing and Plotting Procedures for Biostatistics

MVA.anova

R Documentation

Type II permutation test for constrained multivariate analyses

Description

This function is a wrapper to anova.cca(...,by="terms") but performs type II tests (whereas anova.cca performs type I).

Usage

MVA.anova(object, ...)

Arguments

`object`	a result object from `cca`, `rda`, `capscale` or `dbrda`.
`...`	additional arguments to `anova.cca` (can be `permutations`, `model`, `parallel` and/or `strata`). See help of this function.

Details

See anova.cca for detailed explanation of what is done. The only difference with anova.cca is that MVA.anova performs type II tests instead of type I.

See example of adonis.II for the difference between type I (sequential) and type II tests.