logtiterTable: Get the log titers from an acmap

In Racmacs: Antigenic Cartography Macros

Get the log titers from an acmap

Description

Converts titers to the log scale via via the transformation $log2(x/10)$, lessthan values are reduced by 1 on the log scale and greater than values are increased by 1, hence <10 => -1 and >1280 => 8

Usage

logtiterTable(map)

Arguments

map	The acmap object

Value

Returns a matrix of titers converted to the log scale

See Also

Other map diagnostic functions: agCohesion(), bootstrapBlobs(), bootstrapMap(), checkHemisphering(), dimensionTestMap(), map-table-distances, mapBootstrapCoords, mapDistances(), mapRelaxed(), mapResiduals(), pointStress, ptBootstrapBlob, ptBootstrapCoords(), ptLeverage, ptTriangulationBlob, recalculateStress(), stressTable(), tableColbases(), tableDistances(), triangulationBlobs(), unstableMaps

Other functions relating to map stress calculation: mapDistances(), mapResiduals(), pointStress, recalculateStress(), stressTable(), tableColbases(), tableDistances()

Racmacs documentation built on June 22, 2024, 11:33 a.m.