pt_step7_finalize_plot: Step 7: Finalize plot (legend, theme, title, save, metadata)

In Rclade: Automated Deep-Time Phylogenetic Tree Collapsing and Visualization

Step 7: Finalize plot (legend, theme, title, save, metadata)

Description

Step 7: Finalize plot (legend, theme, title, save, metadata)

Usage

pt_step7_finalize_plot(
  p,
  colors,
  groups,
  rank,
  legend_position,
  legend_nrow,
  legend_ncol,
  legend_title,
  theme_fun,
  add_timescale,
  layout,
  main_title,
  sub_title,
  output,
  width,
  height,
  overwrite,
  tree,
  mrca_map,
  all_group_names,
  actual_ntips,
  detected_format,
  color_palette
)

Value

Final ggplot object with rclade_info attribute.

Rclade documentation built on Sept. 26, 2026, 5:07 p.m.