run_rclade_shiny: Launch Rclade Shiny app

In Rclade: Automated Deep-Time Phylogenetic Tree Collapsing and Visualization

Launch Rclade Shiny app

Description

Provides an interactive web interface for Rclade. Requires the shiny package.

Usage

run_rclade_shiny()

Value

No return value, called for side effects (launches a Shiny web app).

Concurrency

The logger, step-progress, and interrupt subsystems use package-level global environments (.logger_env, .interrupt_env). Within a single R process, multiple concurrent Shiny sessions will share (and may corrupt) this state — log messages, step counters, and interrupt flags can cross between sessions. For production multi-user deployment, run one Shiny instance per R process (e.g., behind a load balancer), or assign a dedicated log file per task via --log_file. A session-scoped state refactor is on the roadmap.

Rclade documentation built on Sept. 26, 2026, 5:07 p.m.