Rdistance: Distance-Sampling Analyses for Density and Abundance Estimation

Distance-sampling is a popular method for estimating density and abundance of organisms in ecology. Rdistance contains routines that assist with analysis of distance-sampling data collected on point or line transects. Distance models are specified using regression-like formula (similar to lm, glm, etc.). Abundance routines perform automated bootstrapping and automated detection-function selection. Overall (study area) and site-level (transect or point) abundance estimates are available. A large suite of classical, parametric detection functions are included along with some uncommon parametric functions (e.g., Gamma, negative exponential) and non-parametric smoothed distance functions. Custom (user-defined) detection functions are easily implemented (see vignette). The help files and vignettes have been vetted by multiple authors and tested in workshop settings.

Package details

AuthorTrent McDonald [cre, aut], Jason Carlisle [aut], Aidan McDonald [aut] (point transect methods), Ryan Nielson [ctb] (smoothed likelihood), Ben Augustine [ctb] (maximization method), James Griswald [ctb] (maximization method), Patrick McKann [ctb] (maximization method), Lacey Jeroue [ctb] (vignettes), Hoffman Abigail [ctb] (vignettes), Kleinsausser Michael [ctb] (vignettes), Joel Reynolds [ctb] (Gamma likelihood), Pham Quang [ctb] (Gamma likelihood), Earl Becker [ctb] (Gamma likelihood), Aaron Christ [ctb] (Gamma likelihood), Brook Russelland [ctb] (Gamma likelihood)
MaintainerTrent McDonald <[email protected]>
LicenseGNU General Public License
Version2.1.3
URL https://github.com/tmcd82070/Rdistance/wiki
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("Rdistance")

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Rdistance documentation built on Jan. 3, 2019, 1:05 a.m.