rduckhts_detect_quality_encoding: Detect FASTQ Quality Encoding
In Rduckhts: 'DuckDB' High Throughput Sequencing File Formats Reader Extension
rduckhts_detect_quality_encoding R Documentation
Detect FASTQ Quality Encoding
Description
Inspects a FASTQ file's observed quality ASCII range and reports compatible
legacy encodings with a heuristic guessed encoding.
Usage
rduckhts_detect_quality_encoding(con, path, max_records = 10000)
Arguments
con
A DuckDB connection with DuckHTS loaded
path
Path to the FASTQ file
max_records
Maximum number of records to inspect
Value
A data frame with the detected quality encoding summary
Rduckhts documentation built on Oct. 25, 2026, 1:08 a.m.
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| rduckhts_detect_quality_encoding | R Documentation |
Detect FASTQ Quality Encoding
Description
Inspects a FASTQ file's observed quality ASCII range and reports compatible legacy encodings with a heuristic guessed encoding.
Usage
rduckhts_detect_quality_encoding(con, path, max_records = 10000)
Arguments
con |
A DuckDB connection with DuckHTS loaded |
path |
Path to the FASTQ file |
max_records |
Maximum number of records to inspect |
Value
A data frame with the detected quality encoding summary
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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