check_gtf: Test consistency and order of a GTF file

View source: R/Rgff.R

check_gtfR Documentation

Test consistency and order of a GTF file

Description

This function tests consistency and order of a GTF file. Optionally, can fix some of the consistency errors and sort the GTF file.

Usage

check_gtf(gtfFile)

Arguments

gtfFile

Path to the input GTF file

Value

A data frame with the errors detected


Rgff documentation built on Sept. 30, 2022, 5:08 p.m.