saf_from_paths: Generates SAF formatted data from a features path file for...

View source: R/Rgff.R

saf_from_pathsR Documentation

Generates SAF formatted data from a features path file for the given blocks and features

Description

This function creates a SAF file from a features path file for the given blocks and features

Usage

saf_from_paths(
  pathsFile,
  groupBy = c("mRNA", "gene"),
  block = c("exon", "CDS")
)

Arguments

pathsFile

Path to the input features path file

groupBy

Vector of features to group by in feature count

block

Vector of features to be used as block in feature count

Value

SAF formatted data frame for the given blocks and features


Rgff documentation built on Sept. 30, 2022, 5:08 p.m.