# Man pages for SEMIDIdentifiability of Linear Structural Equation Models

 ancestors All ancestors of a collection of nodes ancestralID Determines which edges in a mixed graph are... ancestralIdentifyStep Perform one iteration of ancestral identification. createAncestralIdentifier Create an ancestral identification function. createEdgewiseIdentifier Create an edgewise identification function createHalfTrekFlowGraph Helper function to create a flow graph. createHtcIdentifier Create an htc identification function. createHtrGraph Helper function to create a graph encoding htr relationships. createIdentifierBaseCase Create an identifier base case createSimpleBiDirIdentifier Identify bidirected edges if all directed edges are... createTrekFlowGraph Helper function to create a flow graph. createTrekSeparationIdentifier Create an trek separation identification function createTrGraph Helper function to create a graph encoding trek reachable... descendants Get descendants of a node edgewiseID Determines which edges in a mixed graph are... edgewiseIdentifyStep Perform one iteration of edgewise identification. edgewiseTSID Determines which edges in a mixed graph are edgewiseID+TS... flowBetween Flow from one set of nodes to another. FlowGraph Construct FlowGraph object generalGenericID A general generic identification algorithm template. getAncestors Get getAncestors of nodes in a graph. getDescendants Get descendants of nodes in a graph. getHalfTrekSystem Determines if a half-trek system exists in the mixed graph. getMaxFlow Size of largest HT system Y satisfying the HTC for a node v... getMixedCompForNode Get the mixed component of a node in a mixed subgraph. getParents Get getParents of nodes in a graph. getSiblings Get getSiblings of nodes in a graph. getTrekSystem Determines if a trek system exists in the mixed graph. graphID Identifiability of linear structural equation models. graphID.ancestralID Determine generic identifiability of an acyclic mixed graph... graphID.decompose Determine generic identifiability by Tian Decomposition and... graphID.genericID Determine generic identifiability of a mixed graph. graphID.globalID Check for global identifiability of a mixed graph. graphID.htcID Determines if a mixed graph is HTC-identifiable. graphID.main Helper function to handle a graph component. graphID.nonHtcID Check for generic infinite-to-one via the half-trek... htcID Determines which edges in a mixed graph are HTC-identifiable. htcIdentifyStep Perform one iteration of HTC identification. htr Get all HTR nodes from a set of nodes in a graph. htrFrom Half trek reachable nodes. inducedSubgraph Get the induced subgraph on a collection of nodes isSibling Are two nodes siblings? L Get adjacency matrix for directed part. MixedGraph Construct MixedGraph object MixedGraphFixedOrder Construct MixedGraphFixedOrder object mixedGraphHasSimpleNumbering Checks a MixedGraph has appropriate node numbering nodes Get all nodes in the graph. numNodes Number of nodes in the graph. O Get adjacency matrix for bidirected part. parents All parents a collection of nodes. plot Plots the mixed graph plotMixedGraph Plot a mixed graph print.GenericIDResult Prints a GenericIDResult object print.SEMIDResult Prints a SEMIDResult object semID Identifiability of linear structural equation models. SEMID-package SEMID package documentation. siblings All siblings of a collection of nodes stronglyConnectedComponent Strongly connected component stronglyConnectedComponents Strongly connected components subsetsOfSize Returns all subsets of a certain size tianComponent Returns the Tian c-component of a node tianDecompose Performs the tian decomposition on the mixed graph tianIdentifier Identifies components in a tian decomposition tianSigmaForComponent Globally identify the covariance matrix of a C-component toEx Transforms a vector of node indices in the internal rep. into... toIn Transforms a vector of given node indices into their internal... trekSeparationIdentifyStep Perform one iteration of trek separation identification. trFrom Trek reachable nodes. updateEdgeCapacities Update edge capacities. updateVertexCapacities Update vertex capacities. validateMatrices A helper function to validate input matrices.
SEMID documentation built on May 21, 2019, 9:03 a.m.