mean2.2011LJW: Two-sample Test for Multivariate Means by Lopes, Jacob, and...

In SHT: Statistical Hypothesis Testing Toolbox

Two-sample Test for Multivariate Means by Lopes, Jacob, and Wainwright (2011)

Description

Given two multivariate data X and Y of same dimension, it tests

H_0 : μ_x = μ_y\quad vs\quad H_1 : μ_x \neq μ_y

using the procedure by Lopes, Jacob, and Wainwright (2011) using random projection. Due to solving system of linear equations, we suggest you to opt for asymptotic-based p-value computation unless truly necessary for random permutation tests.

Usage

mean2.2011LJW(X, Y, method = c("asymptotic", "MC"), nreps = 1000)

Arguments

X	an (n_x \times p) data matrix of 1st sample.
Y	an (n_y \times p) data matrix of 2nd sample.
method	method to compute p-value. "asymptotic" for using approximating null distribution, and "MC" for random permutation tests. Using initials is possible, "a" for asymptotic for example.
nreps	the number of permutation iterations to be run when method="MC".

Value

a (list) object of S3 class htest containing:

statistic

a test statistic.

p.value

p-value under H_0.

alternative

alternative hypothesis.

method

name of the test.

data.name

name(s) of provided sample data.

References

\insertRef

lopes_more_2011SHT

Examples

## CRAN-purpose small example
smallX = matrix(rnorm(10*3),ncol=10)
smallY = matrix(rnorm(10*3),ncol=10)
mean2.2011LJW(smallX, smallY) # run the test


## empirical Type 1 error 
niter   = 1000
counter = rep(0,niter)  # record p-values
for (i in 1:niter){
  X = matrix(rnorm(10*20), ncol=20)
  Y = matrix(rnorm(10*20), ncol=20)
  
  counter[i] = ifelse(mean2.2011LJW(X,Y)$p.value < 0.05, 1, 0)
}

## print the result
cat(paste("\n* Example for 'mean2.2011LJW'\n","*\n",
"* number of rejections   : ", sum(counter),"\n",
"* total number of trials : ", niter,"\n",
"* empirical Type 1 error : ",round(sum(counter/niter),5),"\n",sep=""))

SHT documentation built on Nov. 3, 2022, 9:06 a.m.