Files in SIMplyBee
'AlphaSimR' Extension for Simulating Honeybee Populations and Breeding Programmes
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/RcppExports.R
R/SIMplyBee.R
R/Class-SimParamBee.R
R/Functions_L2_Colony.R
R/Functions_L0_auxilary.R
R/Functions_L1_Pop.R
R/Functions_L3_Colonies.R
R/Class-Colony.R
R/Class-MultiColony.R
src/Makevars
src/RcppExports.cpp
src/isHeterozygous.h
src/isHeterozygous.cpp
src/simplybee.h
inst/CITATION
inst/doc/E_Genomics.Rmd
inst/doc/D_Crossing.html
inst/doc/D_Crossing.R
inst/doc/G_Sampling_functions.html
inst/doc/B_Multiple_colonies.R
inst/doc/E_Genomics.html
inst/doc/D_Crossing.Rmd
inst/doc/C_Colony_events.R
inst/doc/B_Multiple_colonies.html
inst/doc/G_Sampling_functions.Rmd
inst/doc/G_Sampling_functions.R
inst/doc/F_Quantitative_Genetics.html
inst/doc/F_Quantitative_Genetics.Rmd
inst/doc/Z_FAQ.html
inst/doc/C_Colony_events.html
inst/doc/F_Quantitative_Genetics.R
inst/doc/C_Colony_events.Rmd
inst/doc/A_Honeybee_biology.html
inst/doc/A_Honeybee_biology.Rmd
inst/doc/A_Honeybee_biology.R
inst/doc/Z_FAQ.Rmd
inst/doc/B_Multiple_colonies.Rmd
inst/doc/E_Genomics.R
inst/doc/Z_FAQ.R
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/README.rd
tests/testthat/test-L3_Colonies_functions.R
tests/testthat/test-L1_pop_functions.R
tests/testthat/test-L2_colony_functions.R
tests/testthat/test-L0_auxiliary_functions.R
vignettes/split.png
vignettes/E_Genomics.Rmd
vignettes/Colony_locations.csv
vignettes/founderpop.png
vignettes/split.pdf
vignettes/D_Crossing.Rmd
vignettes/supersede.png
vignettes/G_Sampling_functions.Rmd
vignettes/supersede.pdf
vignettes/collapse.png
vignettes/F_Quantitative_Genetics.Rmd
vignettes/founderpop.pdf
vignettes/swarm.png
vignettes/C_Colony_events.Rmd
vignettes/collapse.pdf
vignettes/A_Honeybee_biology.Rmd
vignettes/Z_FAQ.Rmd
vignettes/decisionTreeCrossing.png
vignettes/B_Multiple_colonies.Rmd
vignettes/swarm.pdf
man/hasCollapsed.Rd
man/getQueenAge.Rd
man/calcQueensPHomBrood.Rd
man/isEmpty.Rd
man/SimParamBee.Rd
man/createDCA.Rd
man/getId.Rd
man/calcBeeGRMIbd.Rd
man/isCsdHeterozygous.Rd
man/selectColonies.Rd
man/downsizePFun.Rd
man/getCastePop.Rd
man/MultiColony-class.Rd
man/collapse.Rd
man/isCsdActive.Rd
man/getCaste.Rd
man/getSnpHaplo.Rd
man/swarm.Rd
man/isVirginQueensPresent.Rd
man/nCaste.Rd
man/nCsdAlleles.Rd
man/createMultiColony.Rd
man/nVirginQueensFun.Rd
man/mapCasteToColonyValue.Rd
man/split.Rd
man/setQueensYearOfBirth.Rd
man/SIMplyBee-package.Rd
man/splitPFun.Rd
man/getDd.Rd
man/getPheno.Rd
man/getCsdAlleles.Rd
man/getCasteSex.Rd
man/getMisc.Rd
man/pullCastePop.Rd
man/getQueenYearOfBirth.Rd
man/cross.Rd
man/getSegSiteGeno.Rd
man/isQueenPresent.Rd
man/createCastePop.Rd
man/getEvents.Rd
man/calcBeeGRMIbs.Rd
man/isWorkersPresent.Rd
man/getBv.Rd
man/reQueen.Rd
man/calcPerformanceCriterion.Rd
man/editCsdLocus.Rd
man/buildUp.Rd
man/replaceCastePop.Rd
man/supersede.Rd
man/nWorkersFun.Rd
man/swarmPFun.Rd
man/nColonies.Rd
man/addCastePop.Rd
man/pullInd.Rd
man/resetEvents.Rd
man/hasSplit.Rd
man/getSegSiteHaplo.Rd
man/hasSwarmed.Rd
man/reduceDroneGeno.Rd
man/isCaste.Rd
man/calcSelectionCriterion.Rd
man/isDronesPresent.Rd
man/combineBeeGametesHaploDiploid.Rd
man/setMisc.Rd
man/isNULLColonies.Rd
man/isSimParamBee.Rd
man/downsize.Rd
man/getQtlGeno.Rd
man/createMatingStationDCA.Rd
man/removeCastePop.Rd
man/removeColonies.Rd
man/pullDroneGroupsFromDCA.Rd
man/getPooledGeno.Rd
man/calcColonyValue.Rd
man/combine.Rd
man/calcInheritanceCriterion.Rd
man/getIbdHaplo.Rd
man/getLocation.Rd
man/combineNULLAndPop.Rd
man/isFathersPresent.Rd
man/isProductive.Rd
man/getGv.Rd
man/nDronesFun.Rd
man/setLocation.Rd
man/rcircle.Rd
man/getAa.Rd
man/combineBeeGametes.Rd
man/pullColonies.Rd
man/hasSuperseded.Rd
man/mapLoci.Rd
man/reduceDroneHaplo.Rd
man/createCrossPlan.Rd
man/createColony.Rd
man/getCasteId.Rd
man/getQtlHaplo.Rd
man/getSnpGeno.Rd
man/getCsdGeno.Rd
man/Colony-class.Rd
man/isGenoHeterozygous.Rd
man/nFathersFun.Rd
man/simulateHoneyBeeGenomes.Rd
man/figures/founderpop-1.png
