getDd: Access dominance values of individuals in a caste

In SIMplyBee: 'AlphaSimR' Extension for Simulating Honeybee Populations and Breeding Programmes

Access dominance values of individuals in a caste

Description

Level 0 function that returns dominance values of individuals in a caste.

Usage

getDd(x, caste = NULL, nInd = NULL, collapse = FALSE, simParamBee = NULL)

getQueenDd(x, collapse = FALSE, simParamBee = NULL)

getFathersDd(x, nInd = NULL, collapse = FALSE, simParamBee = NULL)

getVirginQueensDd(x, nInd = NULL, collapse = FALSE, simParamBee = NULL)

getWorkersDd(x, nInd = NULL, collapse = FALSE, simParamBee = NULL)

getDronesDd(x, nInd = NULL, collapse = FALSE, simParamBee = NULL)

Arguments

x	Pop-class, Colony-class, or MultiColony-class
caste	NULL or character, NULL when x is a Pop-class, and character when x is a Colony-class or MultiColony-class with the possible values of "queen", "fathers", "workers", "drones", "virginQueens", or "all"
nInd	numeric, number of individuals to access, if NULL all individuals are accessed, otherwise a random sample
collapse	logical, if the return value should be a single matrix with dominance values of all the individuals
simParamBee	SimParamBee, global simulation parameters

Value

vector of dominance values when x is Colony-class and list of vectors of dominance values when x is MultiColony-class, named by colony id when x is MultiColony-class

# Not exporting this function, since the theory behind it is not fully developed

Functions

• getQueenDd(): Access dominance value of the queen

• getFathersDd(): Access dominance values of fathers

• getVirginQueensDd(): Access dominance values of virgin queens

• getWorkersDd(): Access dominance values of workers

• getDronesDd(): Access dominance values of drones

See Also

dd and vignette(topic = "QuantitativeGenetics", package = "SIMplyBee")

SIMplyBee documentation built on Sept. 20, 2024, 5:07 p.m.