Files in SNPknock
Knockoffs for Hidden Markov Models and Genetic Data
MD5
NEWS
DESCRIPTION
README.md
NAMESPACE
inst/REFERENCES.bib
inst/CITATION
inst/auto/REFERENCES.el
inst/doc/SNPknock.html
inst/doc/SNPknock.R
inst/doc/genotypes.Rmd
inst/doc/SNPknock.Rmd
inst/doc/genotypes.html
inst/doc/genotypes.R
inst/extdata/haplotypes_rhat.txt
inst/extdata/haplotypes_hmm.RData
inst/extdata/genotypes_rhat.txt
inst/extdata/haplotypes.RData
inst/extdata/genotypes.inp
inst/extdata/haplotypes_origchars
inst/extdata/genotypes_hmm.RData
inst/extdata/haplotypes_alphahat.txt
inst/extdata/haplotypes.inp
inst/extdata/genotypes.RData
inst/extdata/hmm.RData
inst/extdata/genotypes_alphahat.txt
inst/extdata/genotypes_origchars
inst/extdata/haplotypes_thetahat.txt
inst/extdata/genotypes_thetahat.txt
vignettes/bibliography_old.bib
vignettes/genotypes.Rmd
vignettes/SNPknock.Rmd
vignettes/auto/bibliography.el
R/fastphase.R
R/knockoffs_snp.R
R/models.R
R/RcppExports.R
R/knockoffs.R
src/hmm.h
src/genotypes.h
src/dmc.cpp
src/haplotypes.h
src/Makevars.win
src/hmm.cpp
src/genotypes.cpp
src/utils.cpp
src/RcppExports.cpp
src/dmc.h
src/wrapper.cpp
src/utils.h
src/haplotypes.cpp
src/Makevars
src/interface.cpp
src/interface.h
man/rand_weighted.Rd
man/assemble_pEmit.Rd
man/assemble_pInit_phased.Rd
man/assemble_pEmit_phased.Rd
man/knockoffHaplotypes.Rd
man/compute_Q1.Rd
man/knockoffHMM.Rd
man/loadHMM.Rd
man/knockoffDMC_wrapper.Rd
man/assemble_Q.Rd
man/sampleDMC.Rd
man/knockoffGenotypes.Rd
man/writeXtoInp.Rd
man/knockoffDMC.Rd
man/sampleHMM.Rd
man/GroupHaplotypes_wrapper.Rd
man/assemble_pInit.Rd
man/GroupGenotypes_wrapper.Rd
man/knockoffHMM_wrapper.Rd
man/loadEMParameters.Rd
man/runFastPhase.Rd
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test_group.R
tests/testthat/helper_test.R
tests/testthat/test_genetic.R
tests/testthat/test_fastphase.R
tests/testthat/test_knockoffs.R
