checkAlleleSyntax: Check allele syntax

In SSHAARP: Searching Shared HLA Amino Acid Residue Prevalence

Check allele syntax

Description

Checks if allele syntax is valid.

Usage

checkAlleleSyntax(allele, filename)

Arguments

allele	An allele name written in the IPD-IMGT/HLA Database format.
filename	The full file path of the user specified dataset if the user wishes to use their own file, or the pre-bundled Solberg dataset. User provided datasets must be a .dat, .txt, or.csv file, and must conform to the structure and format of the Solberg dataset.

Value

TRUE if allele syntax is correct. Otherwise,a vector containing FALSE and an error message is returned.

Note

For internal SSHAARP use only.

SSHAARP documentation built on June 18, 2025, 1:08 a.m.