Description Usage Arguments Value Examples
Consumes the alignment data frame produced by BLAASD() and returns an alignment data frame of alleles that share a specific amino acid motif.
1 | findMotif(motif)
|
motif |
An amino acid motif in the following format: Locus*##$~##$~##$, where ## identifies a peptide position, and $ identifies an amino acid residue. Motifs can include any number of amino acids. |
An amino acid alignment dataframe of alleles that share the specified motif. If the motif is not found in any alleles, or the motif has formatting errors, a warning message is returned.
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