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STDistance: Spatial Transcriptomics Distance Calculation and Visualization
Analysis of spatial relationships between cell types in spatial transcriptomics data. Spatial proximity is a critical factor in cell-cell communication. The package calculates nearest neighbor distances between specified cell types and provides visualization tools to explore spatial patterns. Applications include studying cell-cell interactions, immune microenvironment characterization, and spatial organization of tissues.
Getting started
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Package details |
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| Author | Zixiang Wang [aut, cre] (ORCID: <https://orcid.org/0000-0001-5252-9764>), Lei Yang [aut], Zhaojian Liu [aut] |
| Maintainer | Zixiang Wang <wangzixiang@sdu.edu.cn> |
| License | GPL (>= 3) |
| Version | 0.6.4 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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