Nothing
## ----setup, include = FALSE---------------------------------------------------
knitr::opts_chunk$set(
collapse = TRUE,
warning = FALSE,
comment = "#>"
)
## ---- echo=FALSE--------------------------------------------------------------
source(file = "../R/mainFunction.R")
source(file = "../R/subFunction.R")
source(file = "../R/visualization.R")
library(stats)
library(ggplot2)
library(reshape2)
library(RColorBrewer)
## ---- eval = FALSE------------------------------------------------------------
# install.packages("STMotif")
## ---- eval = FALSE------------------------------------------------------------
# library(STMotif)
## ---- echo=TRUE---------------------------------------------------------------
# The process is launched on the provided example dataset
dim(D <- STMotif::example_dataset)
# Normalizartion and SAX indexing
DS <- NormSAX(D = STMotif::example_dataset,a =5)
# Information of the normalized and SAX indexing dataset
# The candidates built
head(NormSAX(D = STMotif::example_dataset, a = 5)[,1:10])
## ---- echo=TRUE---------------------------------------------------------------
# The list of motifs
# stmotifs <- SearchSTMotifs(D,DS,w,a,sb,tb,si,ka)
stmotifs <- SearchSTMotifs(D,DS,4,5,4,10,2,2)
stmotifs[[1]]
## ---- echo=TRUE---------------------------------------------------------------
# The rank list of stmotifs
rstmotifs <- RankSTMotifs(stmotifs)
rstmotifs[[1]]
## ---- echo=TRUE---------------------------------------------------------------
# CSAMiningProcess
stmotifs <- CSAMiningProcess(D,DS,4,5,4,10,2,2)
rstmotifs[[1]]
## ----fig, fig.height = 4, fig.width = 5, fig.align = "center"-----------------
display_motifsDataset(dataset = STMotif::example_dataset, rstmotifs[c(1:4)], 5)
## ----fig1, fig.height = 4, fig.width = 5, fig.align = "center"----------------
display_motifsSTSeries(dataset = STMotif::example_dataset,rstmotifs[c(1:4)],space = c(1:4,10:12))
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