BLMM | Block length of the missing motif. |
extractedReadsList-class | Extract STR region information |
extractedReadsListCombined-class | Combined extract STR region information. |
extractedReadsListNonCombined-class | Combined extract STR region information. |
extractedReadsListReverseComplement-class | Extract STR region information of the reverse complement DNA... |
findNeighbours | Find neighbours |
findNeighbours-stringCoverageGenotypeList-method | Find neighbours |
findStutter | Find stutters |
findStutter-stringCoverageGenotypeList-method | Find stutters |
flankingRegions | Flanking regions |
genotypeIdentifiedList-class | Genotype list |
genotypeList | Genotype list |
getGenotype | Assigns genotype. |
getGenotype-stringCoverageList-method | Assigns genotype. |
identifiedSTRs | Identified STR regions |
identifyNoise | Idenfities the noise. |
identifyNoise-stringCoverageList-method | Idenfities the noise. |
identifySTRRegions | Identify the STR regions of a fastq-file or... |
identifySTRRegions-character-method | Identify the STR regions of a fastq-file or... |
identifySTRRegions.control | Control function for identifySTRRegions |
identifySTRRegions-ShortReadQ-method | Identify the STR regions of a fastq-file or... |
mergeGenotypeStringCoverage | Merge genotypeIdentifiedList and stringCoverageList. |
mergeGenotypeStringCoverage-genotypeIdentifiedList-method | Merge genotypeIdentifiedList and stringCoverageList. |
mergeNoiseStringCoverage | Merge noiseIdentifiedList and stringCoverageList. |
mergeNoiseStringCoverage-noiseIdentifiedList-method | Merge noiseIdentifiedList and stringCoverageList. |
neighbourList-class | A neighbour list |
noiseIdentifiedList-class | Noise list |
noiseList | Noise list |
probabilityOfError | Quality score to probability |
qualityScore | Convert probability to quality score |
stringCoverage | Get string coverage STR identified objects. |
stringCoverage.control | String coverage coontrol object |
stringCoverage-extractedReadsListCombined-method | Get string coverage STR identified objects. |
stringCoverage-extractedReadsList-method | Get string coverage STR identified objects. |
stringCoverage-extractedReadsListNonCombined-method | Get string coverage STR identified objects. |
stringCoverage-extractedReadsListReverseComplement-method | Get string coverage STR identified objects. |
stringCoverageGenotypeList | Combined string coverage and genotype information |
stringCoverageGenotypeList-class | Combined stringCoverage- and genotypeIdentifiedList |
stringCoverageList | Aggregated string coverage. |
stringCoverageList-class | A string coverage list |
stringCoverageNoiseList-class | Combined stringCoverage- and noiseIdentifiedList |
STRMPSWorkflow | Workflow function |
STRMPSWorkflowBatch | Batch wrapper for the workflow function |
STRMPSWorkflowCollectStutters | Collect stutters files |
workflow.control | Workflow default options |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.