findNeighbours-stringCoverageGenotypeList-method: Find neighbours
In STRMPS: Analysis of Short Tandem Repeat (STR) Massively Parallel Sequencing (MPS) Data
Description
Usage
Arguments
Value
Description
Generic function for finding neighbouring strings, given identified alleles.
Usage
1
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## S4 method for signature 'stringCoverageGenotypeList'
findNeighbours(stringCoverageGenotypeListObject,
searchDirection = -1, trace = FALSE)
Arguments
stringCoverageGenotypeListObject
A stringCoverageGenotypeList-class object.
searchDirection
The direction to search for neighbouring strings. Default is -1, indicating a search for '-1' stutters.
trace
Should a trace be shown?
Value
A 'neighbourList' with the neighbouring strings, in the specified direction, for the identified allele regions.
STRMPS documentation built on May 2, 2019, 3:35 a.m.
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Description Usage Arguments Value
Description
Generic function for finding neighbouring strings, given identified alleles.
Usage
1 2 3 | ## S4 method for signature 'stringCoverageGenotypeList'
findNeighbours(stringCoverageGenotypeListObject,
searchDirection = -1, trace = FALSE)
|
Arguments
stringCoverageGenotypeListObject |
A stringCoverageGenotypeList-class object. |
searchDirection |
The direction to search for neighbouring strings. Default is -1, indicating a search for '-1' stutters. |
trace |
Should a trace be shown? |
Value
A 'neighbourList' with the neighbouring strings, in the specified direction, for the identified allele regions.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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