print.SUMMERprojlist | R Documentation |
This function is the print method for class SUMMERprojlist
.
## S3 method for class 'SUMMERprojlist'
print(x, ...)
x |
output from |
... |
not used |
Zehang Li
## Not run:
library(SUMMER)
library(dplyr)
data(DemoData)
# Create dataset of counts
counts.all <- NULL
for(i in 1:length(DemoData)){
counts <- getCounts(DemoData[[i]][, c("clustid", "time", "age", "died",
"region", "strata")],
variables = 'died', by = c("age", "clustid", "region",
"time", "strata"))
counts <- counts %>% mutate(cluster = clustid, years = time, Y=died)
counts$strata <- gsub(".*\\.","",counts$strata)
counts$survey <- names(DemoData)[i]
counts.all <- rbind(counts.all, counts)
}
# fit cluster-level model on the periods
periods <- levels(DemoData[[1]]$time)
fit <- smoothCluster(data = counts.all,
Amat = DemoMap$Amat,
time.model = "rw2",
st.time.model = "rw1",
strata.time.effect = TRUE,
survey.effect = TRUE,
family = "betabinomial",
year_label = c(periods, "15-19"))
summary(fit)
est <- getSmoothed(fit, nsim = 1000)
## End(Not run)
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