Smisc: Sego Miscellaneous
Version 0.3.6

A collection of functions for statistical computing and data manipulation in R. Includes routines for data ingestion, operating on dataframes and matrices, conversion to and from lists, converting factors, filename manipulation, programming utilities, parallelization, plotting, statistical and mathematical operations, and time series.

AuthorLandon Sego [aut, cre]
Date of publication2016-06-23 09:05:09
MaintainerLandon Sego <Landon.Sego@pnnl.gov>
LicenseBSD_3_clause + file LICENSE
Version0.3.6
URL http://pnnl.github.io/Smisc
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("Smisc")

Getting started

Package overview
README.md

Popular man pages

cusum: Calculates a sequence of Cusum statistics
findDepMat: Identify linearly dependent rows or columns in a matrix
hpd: Calculate the highest posterior density credible interval for...
loadObject: Loads and returns the object(s) in one or more ".Rdata" files
pvar: Prints the name and value of one or more objects
qbind: Quickly row and column bind many objects together at once
timeDiff.eg: Four short time series
See all...

All man pages Function index File listing

Man pages

allMissing: Identifies missing rows or columns in a data frame or matrix
as.numericSilent: Convert any vector to numeric, if possible
comboList: Produces all possible combinations of a set of linear model...
cumMax: Computes the maximum of the vector up to the current index
cumsumNA: Computes the cummulative sum of a vector without propagating...
cusum: Calculates a sequence of Cusum statistics
dataIn: A flexible way to import data into R.
df2list: Row-wise conversion of a data frame to a list
dfplapply: Parallelized single row processing of a data frame
dframeEquiv: Examines the equivalence of two dataframes or matrices
dkbinom: Probability functions for the sum of k independent binomials
doCallParallel: Call a function with a vectorized input in parallel
factor2character: Converts all factor variables in a dataframe to character...
factor2numeric: A simple function for converting factors to numeric values
findDepMat: Identify linearly dependent rows or columns in a matrix
formatDT: Converts date or datetime strings into alternate formats
generics: Generic for 'signal'
getExtension: Get the extension of a vector of filenames
getPath: Get the path of a vector of filenames
grabLast: Get the final set of characters after a single-character...
hardCode: Facilitate hard coding constants into R
hpd: Calculate the highest posterior density credible interval for...
integ: Simple numerical integration routine
linearMap: Linear mapping of a numeric vector or scalar
list2df: Convert a list to a data frame
loadObject: Loads and returns the object(s) in one or more ".Rdata" files
more: Display the contents of a file to the R console
movAvg2: Calculate the moving average using a 2-sided, symmetric...
openDevice: Opens a graphics device based on the filename extension
padZero: Pad a vector of numbers with zeros
parLapplyW: A wrapper for parLapply
parseJob: Parses a collection of elements into (almost) equal-sized...
pcbinom: A continuous version of the binomial cdf
pddply: Parallel wrapper for plyr::ddply
plapply: Simple parallelization of lapply
plotFun: Plot one or more functions on a single plot
PowerData: An example of power data
pvar: Prints the name and value of one or more objects
qbind: Quickly row and column bind many objects together at once
rma: Remove all objects from the global environment
select: Select rows or columns from data frames or matrices while...
selectElements: Validate selected elements from a character vector
sepList: Separate a list into distinct objects
smartFilter: Calculate a moving dot product (or filter) over a numeric...
smartRbindMat: Row bind matrices whose column names may not be the same
smartTimeAxis: Produces a time axis with smart spacing
Smisc-package: Smisc: Sego Miscellaneous
sourceDir: Sources all files with '.R' or '.r' extensions in a directory
stopifnotMsg: Check multiple conditions and return coresponding error...
stripExtension: Remove the extension of a vector of filenames
stripPath: Remove the path from a vector of filenames
timeData: Generic data frame with a time variable
timeDiff: Subtracts two time series by matching irregular time indexes
timeDiff.eg: Four short time series
timeIntegration: Approximate the integral of a vector of data over time
timeIt: Times the execution of an expression.
timeStamp: Embeds the present datetime into a file name
umvueLN: Computes UMVUEs of lognormal parameters
vertErrorBar: Draw vertical error bar(s) on a plot

Functions

PowerData Man page
Smisc Man page
Smisc-package Man page
allMissing Man page Source code
as.numericSilent Man page Source code
blendArgs Source code
check_kbinom Source code
comboList Man page Source code
cumMax Man page Source code
cumsumNA Man page Source code
cusum Man page Source code
cvolve Source code
dataIn Man page Source code
df2list Man page Source code
dfplapply Man page Source code
dframeEquiv Man page Source code
dkbinom Man page Source code
doCallParallel Man page Source code
factor2character Man page Source code
factor2numeric Man page Source code
findDepMat Man page Source code
formatDT Man page Source code
getExtension Man page Source code
getPath Man page Source code
grabLast Man page Source code
hardCode Man page Source code
hpd Man page Source code
integ Man page Source code
linearMap Man page Source code
list2df Man page Source code
loadObject Man page Source code
more Man page Source code
movAvg2 Man page Source code
onUnload Source code
openDevice Man page Source code
padZero Man page Source code
parLapplyW Man page Source code
parseJob Man page Source code
pcbinom Man page Source code
pddply Man page Source code
pkbinom Man page Source code
plapply Man page Source code
plot.cusum Man page Source code
plot.hpd Man page Source code
plot.movAvg2 Man page Source code
plotFun Man page Source code
print.cusum Man page Source code
print.hpd Man page Source code
print.movAvg2 Man page Source code
printWithoutAttributes Source code
psi_n_t Source code
pvar Man page Source code
qbind Man page Source code
rma Man page Source code
select Man page Source code
selectElements Man page Source code
sepList Man page Source code
signal Man page Source code
signal.cusum Man page Source code
smartFilter Man page Source code
smartRbindMat Man page Source code
smartTimeAxis Man page Source code
sourceDir Man page Source code
stopifnotMsg Man page Source code
stripExtension Man page Source code
stripPath Man page Source code
timeData Man page
timeDiff Man page Source code
timeDiff.eg Man page
timeIntegration Man page Source code
timeIt Man page Source code
timeStamp Man page Source code
tryCatchWE Source code
umvueLN Man page Source code
vertErrorBar Man page Source code

Files

TODO
inst
inst/CITATION
inst/misc
inst/misc/in_development
inst/misc/in_development/smartRbindDF.R
inst/misc/deprecated
inst/misc/deprecated/d2binom.R
inst/misc/deprecated/validEmailAddress.R
inst/misc/deprecated/filenameManipulation.R
inst/misc/deprecated/LICENSE
inst/doc
inst/doc/Smisc_tutorial.html
tests
tests/runtest
tests/testthat.R
tests/testthat
tests/testthat/test_pddply.R
tests/testthat/test_timeIntegration.R
tests/testthat/test_padZero.R
tests/testthat/test_vertErrorBar.R
tests/testthat/test_parLapplyW.R
tests/testthat/test_plotFun.R
tests/testthat/test_stripExtension.R
tests/testthat/test_timeStamp.R
tests/testthat/test_rma.R
tests/testthat/test_cumsumNA.R
tests/testthat/test_as.numericSilent.R
tests/testthat/function_list.txt
tests/testthat/test_doCallParallel.R
tests/testthat/test_dfplapply.R
tests/testthat/test_hardCode.R
tests/testthat/test_umvueLN.R
tests/testthat/test_select.R
tests/testthat/test_pvar.R
tests/testthat/test_integ.R
tests/testthat/test_parseJob.R
tests/testthat/test_more.R
tests/testthat/validationData
tests/testthat/validationData/parseJob.Rdata
tests/testthat/test_dkbinom.R
tests/testthat/test_cumMax.R
tests/testthat/test_plapply.R
tests/testthat/test_openDevice.R
tests/testthat/test_allMissing.R
src
src/psi_n_t.c
src/pkbinom.c
src/cumsumNA.c
src/smartFilter.c
src/max.le.i.c
src/cusum.c
src/convolv2binom.c
src/dkbinom.c
NAMESPACE
NEWS.md
data
data/PowerData.RData
data/timeDiff.eg.RData
data/timeData.rda
R
R/select.R
R/dkbinom.R
R/cumMax.R
R/list2df.R
R/linearMap.R
R/plapply.R
R/Smisc-package.R
R/parLapplyW.R
R/factor2numeric.R
R/cumsumNA.R
R/umvueLN.R
R/as.numericSilent.R
R/cusum.R
R/plotFun.R
R/pddply.R
R/factor2character.R
R/unload_Smisc.R
R/more.R
R/generics.R
R/getPath.R
R/PowerData.R
R/timeIntegration.R
R/sourceDir.R
R/timeIt.R
R/comboList.R
R/dataIn.R
R/timeDiff.R
R/smartTimeAxis.R
R/doCallParallel.R
R/grabLast.R
R/sepList.R
R/df2list.R
R/loadObject.R
R/parseJob.R
R/smartFilter.R
R/formatDT.R
R/findDepMat.R
R/stripPath.R
R/timeStamp.R
R/timeDiff.eg.R
R/pcbinom.R
R/stripExtension.R
R/smartRbindMat.R
R/helper_functions.R
R/vertErrorBar.R
R/getExtension.R
R/timeData.R
R/hardCode.R
R/allMissing.R
R/stopifnotMsg.R
R/selectElements.R
R/dframeEquiv.R
R/qbind.R
R/padZero.R
R/openDevice.R
R/movAvg2.R
R/integ.R
R/rma.R
R/hpd.R
R/dfplappy.R
R/pvar.R
README.md
MD5
DESCRIPTION
man
man/grabLast.Rd
man/formatDT.Rd
man/timeDiff.eg.Rd
man/dfplapply.Rd
man/factor2numeric.Rd
man/stopifnotMsg.Rd
man/findDepMat.Rd
man/cusum.Rd
man/qbind.Rd
man/dataIn.Rd
man/sourceDir.Rd
man/more.Rd
man/integ.Rd
man/movAvg2.Rd
man/selectElements.Rd
man/parLapplyW.Rd
man/openDevice.Rd
man/rma.Rd
man/hardCode.Rd
man/timeData.Rd
man/timeIt.Rd
man/PowerData.Rd
man/sepList.Rd
man/umvueLN.Rd
man/allMissing.Rd
man/smartTimeAxis.Rd
man/plotFun.Rd
man/pvar.Rd
man/timeDiff.Rd
man/pddply.Rd
man/generics.Rd
man/pcbinom.Rd
man/linearMap.Rd
man/plapply.Rd
man/padZero.Rd
man/comboList.Rd
man/as.numericSilent.Rd
man/Smisc-package.Rd
man/stripPath.Rd
man/factor2character.Rd
man/stripExtension.Rd
man/dframeEquiv.Rd
man/cumMax.Rd
man/list2df.Rd
man/vertErrorBar.Rd
man/doCallParallel.Rd
man/dkbinom.Rd
man/parseJob.Rd
man/getPath.Rd
man/getExtension.Rd
man/loadObject.Rd
man/timeStamp.Rd
man/cumsumNA.Rd
man/smartRbindMat.Rd
man/df2list.Rd
man/timeIntegration.Rd
man/smartFilter.Rd
man/hpd.Rd
man/select.Rd
LICENSE
Smisc documentation built on May 19, 2017, 11:54 p.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

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