Man pages for SpaCCr
Spatial Convex Clustering
| CNVPlotSeriesMeans | Plot subjects' copy number data with cluster means overlayed... |
| GetClusters | Compute Clusters from fusions |
| GetGammaCV | Get optimal cross validated gamma values by various rules |
| GetParBlocks | Function to compute blocks for parallization; should not be... |
| hello | Hello, World! |
| methy | A subset of methylation data for 50 subjects |
| MethyRegionPlot | Plots methylation data by Genomic Coordinates for a given... |
| PlotCV | A function for plotting cross validation errors |
| SpaCC | Base function for computing SpaCC solution for single... |
| SpaCC_CV | Perform Cross Validation to select gamma/sparsity level |
| SpaCC_Methy | Performs Spatial Convex Clustering for methylation data |
| SpaCC_Missing | Solve Spatial Convex Clustering problem for missing data |
| SpaCC_Path | Solve Spatial Convex Clustering problem for path of... |
| SpaCC_Path_Parallel | Solve Spatial Convex Clustering problem for path of... |
| ThreshV | Threshold differences |
