Spatial Convex Clustering

CNVPlotSeriesMeans | Plot subjects' copy number data with cluster means overlayed... |

GetClusters | Compute Clusters from fusions |

GetGammaCV | Get optimal cross validated gamma values by various rules |

GetParBlocks | Function to compute blocks for parallization; should not be... |

hello | Hello, World! |

methy | A subset of methylation data for 50 subjects |

MethyRegionPlot | Plots methylation data by Genomic Coordinates for a given... |

PlotCV | A function for plotting cross validation errors |

SpaCC | Base function for computing SpaCC solution for single... |

SpaCC_CV | Perform Cross Validation to select gamma/sparsity level |

SpaCC_Methy | Performs Spatial Convex Clustering for methylation data |

SpaCC_Missing | Solve Spatial Convex Clustering problem for missing data |

SpaCC_Path | Solve Spatial Convex Clustering problem for path of... |

SpaCC_Path_Parallel | Solve Spatial Convex Clustering problem for path of... |

ThreshV | Threshold differences |

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