Description Usage Arguments Value
Implements k-fold cross validation for aim.batting.
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y |
data frame containing the response |
x |
data frame containing the predictor |
censor.vec |
data frame giving the censor status (only for TTE data , censor=0,event=1) - default = NULL |
trt.vec |
data frame giving the censor status (only for TTE data , censor=0,event=1) - default = NULL |
trtref |
treatment reference indicator: 1=treatment, 0=control |
type |
data type - "c" - continuous , "b" - binary, "s" - time to event - default = "c" |
n.boot |
number of bootstraps in bootstrapping step. |
des.res |
the desired response. "larger": prefer larger response. "smaller": prefer smaller response |
min.sigp.prcnt |
desired proportion of signature positive group size for a given cutoff. |
mc.iter |
# of iterations for the MC procedure to get a stable "best number of predictors" |
mincut |
the minimum cutting proportion for the binary rule at either end. It typically is between 0 and 0.2. It is the parameter in the functions of AIM package. |
pre.filter |
NULL, no prefiltering conducted;"opt", optimized number of predictors selected; An integer: min(opt, integer) of predictors selected |
filter.method |
NULL, no prefiltering, "univariate", univaraite filtering; "glmnet", glmnet filtering |
k.fold |
# cross-validation folds |
cv.iter |
Algotithm terminates after cv.iter successful iterations of cross-validation |
max.iter |
total # iterations (including unsuccessful) allowed. |
"cv.aim.batting" returns a list with following entries:
stats.summary |
Summary of performance statistics. |
pred.classes |
Data frame containing the predictive clases (TRUE/FALSE) for each iteration. |
folds |
Data frame containing the fold indices (index of the fold for each row) for each iteration. |
sig.list |
List of length cv.iter * k.fold containing the signature generated at each of the k folds, for all iterations. |
error.log |
List of any error messages that are returned at an iteration. |
interplot |
Treatment*subgroup interaction plot for predictive case |
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