SuperExactTest: Exact Test and Visualization of Multi-Set Intersections

Efficient statistical testing and scalable visualization of intersections among multiple sets.

Author
Minghui Wang, Yongzhong Zhao and Bin Zhang
Date of publication
2015-11-10 18:23:11
Maintainer
Minghui Wang <minghui.wang@mssm.edu>
License
GPL-3
Version
0.99.2

View on CRAN

Man pages

Cancer
Cancer Census Dataset
cpsets
Multi-Set Intersection Probability
eqtls
cis-eQTLs
GWAS
GAWS Catalog Dataset
intersect
Set Operations
jacaard
Calculate Jaccard Index
MSET
Exact Test of Multi-Set Intersection
msets
Class to Contain Multi-Set Intersections
plot
Draw Multi-Set Intersections
summary
Summarize an msets Object
supertest
Calculate Intersections Among Multiple Sets and Perform...

Files in this package

SuperExactTest
SuperExactTest/inst
SuperExactTest/inst/doc
SuperExactTest/inst/doc/set_html.html
SuperExactTest/inst/doc/set_html.R
SuperExactTest/inst/doc/set_html.Rmd
SuperExactTest/src
SuperExactTest/src/cmp.c
SuperExactTest/src/pmvhyper.c
SuperExactTest/src/dmvhyper.c
SuperExactTest/src/binom.c
SuperExactTest/src/mvhyper.h
SuperExactTest/src/dmvhyperLog.c
SuperExactTest/NAMESPACE
SuperExactTest/data
SuperExactTest/data/Cancer.RData
SuperExactTest/data/eqtls.RData
SuperExactTest/data/GWAS.RData
SuperExactTest/R
SuperExactTest/R/miscellanea.R
SuperExactTest/R/supertest.R
SuperExactTest/R/vis.R
SuperExactTest/R/MSET.R
SuperExactTest/R/psets.R
SuperExactTest/R/intersect.R
SuperExactTest/vignettes
SuperExactTest/vignettes/set_html.Rmd
SuperExactTest/MD5
SuperExactTest/build
SuperExactTest/build/vignette.rds
SuperExactTest/DESCRIPTION
SuperExactTest/man
SuperExactTest/man/Cancer.Rd
SuperExactTest/man/GWAS.Rd
SuperExactTest/man/supertest.Rd
SuperExactTest/man/jacaard.Rd
SuperExactTest/man/intersect.Rd
SuperExactTest/man/MSET.Rd
SuperExactTest/man/cpsets.Rd
SuperExactTest/man/plot.Rd
SuperExactTest/man/summary.Rd
SuperExactTest/man/msets.Rd
SuperExactTest/man/eqtls.Rd