TCGA2STAT: Simple TCGA Data Access for Integrated Statistical Analysis in R

Automatically downloads and processes TCGA genomics and clinical data into a format convenient for statistical analyses in the R environment.

AuthorYing-Wooi Wan, Genevera I. Allen, Matthew L. Anderson, Zhandong Liu
Date of publication2015-10-22 22:14:30
MaintainerYing-Wooi Wan <yingwoow@bcm.edu>
LicenseGPL-2
Version1.2
http://www.liuzlab.org/TCGA2STAT/

View on CRAN

Files in this package

TCGA2STAT
TCGA2STAT/inst
TCGA2STAT/inst/doc
TCGA2STAT/inst/doc/TCGA2STAT.html
TCGA2STAT/inst/doc/TCGA2STAT.Rmd
TCGA2STAT/NAMESPACE
TCGA2STAT/data
TCGA2STAT/data/geneinfo.rda
TCGA2STAT/R
TCGA2STAT/R/TCGA2STAT.R
TCGA2STAT/vignettes
TCGA2STAT/vignettes/viz.misc.R
TCGA2STAT/vignettes/TCGA2STAT_vig.bib
TCGA2STAT/vignettes/TCGA2STAT.Rmd
TCGA2STAT/vignettes/DataPlatforms.pdf
TCGA2STAT/vignettes/CancerDataChecklist.pdf
TCGA2STAT/vignettes/figs
TCGA2STAT/vignettes/figs/hist_27kov.png
TCGA2STAT/vignettes/figs/yplot.png
TCGA2STAT/vignettes/figs/tcga2statlogo4-1024x294.png
TCGA2STAT/vignettes/figs/hist_exp_u133aov.png
TCGA2STAT/vignettes/figs/indplot2.png
TCGA2STAT/vignettes/figs/kmplot.png
TCGA2STAT/vignettes/figs/lusc.rnaseq2.saved
TCGA2STAT/vignettes/figs/Thumbs.db
TCGA2STAT/vignettes/figs/lusc.methyl.saved
TCGA2STAT/vignettes/figs/hist_expovdat.png
TCGA2STAT/vignettes/figs/hist_huexov.png
TCGA2STAT/vignettes/figs/xplot.png
TCGA2STAT/vignettes/figs/indplot.png
TCGA2STAT/MD5
TCGA2STAT/build
TCGA2STAT/build/vignette.rds
TCGA2STAT/DESCRIPTION
TCGA2STAT/man
TCGA2STAT/man/TCGA2STAT-package.Rd TCGA2STAT/man/getTCGA.Rd TCGA2STAT/man/SampleSplit.Rd TCGA2STAT/man/geneinfo.Rd TCGA2STAT/man/TumorNormalMatch.Rd TCGA2STAT/man/OMICSBind.Rd

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