API for TESS
Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events
| Global functions | |
|---|---|
| TESS | Man page |
| TESS-package | Man page |
| cettiidae | Man page |
| conifers | Man page |
| equations_p1_rateshift_CPP | Source code |
| equations_pSurvival_rateshift_CPP | Source code |
| find.max | Source code |
| first | Source code |
| globalBiDe.analysis | Man page |
| globalBiDe.output.summary | Man page |
| last | Source code |
| mammalia | Man page |
| rejection.sample.simple | Source code |
| tess.PosteriorPrediction | Man page Source code |
| tess.PosteriorPredictiveTest | Man page Source code |
| tess.analysis | Man page Source code |
| tess.create.phylo | Source code |
| tess.equations.nTaxa.expected.constant | Source code |
| tess.equations.nTaxa.expected.fastApprox | Source code |
| tess.equations.nTaxa.expected.reconstructed.constant | Source code |
| tess.equations.nTaxa.expected.reconstructed.fastApprox | Source code |
| tess.equations.p1.constant | Source code |
| tess.equations.p1.fastApprox | Source code |
| tess.equations.p1.rateshift | Source code |
| tess.equations.pN.constant | Source code |
| tess.equations.pN.fastApprox | Source code |
| tess.equations.pN.rateshift | Source code |
| tess.equations.pSurvival.constant | Source code |
| tess.equations.pSurvival.fastApprox | Source code |
| tess.equations.pSurvival.rateshift | Source code |
| tess.equations.pWaiting.constant | Source code |
| tess.likelihood | Man page Source code |
| tess.likelihood.constant | Source code |
| tess.likelihood.function | Source code |
| tess.likelihood.rateshift | Man page Source code |
| tess.mcmc | Man page Source code |
| tess.nTaxa.expected | Man page Source code |
| tess.ode.piecewise | Source code |
| tess.pathSampling | Man page Source code |
| tess.plot.multichain.diagnostics | Man page Source code |
| tess.plot.output | Man page Source code |
| tess.plot.singlechain.diagnostics | Man page Source code |
| tess.prepare.pdf | Source code |
| tess.process.output | Man page Source code |
| tess.sim.age | Man page Source code |
| tess.sim.age.constant | Source code |
| tess.sim.age.function | Source code |
| tess.sim.age.rateshift | Source code |
| tess.sim.taxa | Man page Source code |
| tess.sim.taxa.age | Man page Source code |
| tess.sim.taxa.age.constant | Source code |
| tess.sim.taxa.age.function | Source code |
| tess.sim.taxa.age.rateshift | Source code |
| tess.sim.taxa.constant | Source code |
| tess.sim.taxa.function | Source code |
| tess.steppingStoneSampling | Man page Source code |
